Penaeus vannamei (Pacific white shrimp): 113827002
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Entry
113827002 CDS
T06111
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113827002
04131 Membrane trafficking [BR:
pvm04131
]
113827002
04121 Ubiquitin system [BR:
pvm04121
]
113827002
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113827002
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113827002
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113827002
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113827002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113827002
NCBI-ProteinID:
XP_027235702
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MADKKNKRRGKHAMATNTRSTSGTNGNPRQRTPQNRGDSPADDSSRKDDGEYEEQRRSRG
RGRGRGRPRGRARGPPRGLRVNKRNKIESEEEEEEPAPPPVDENEPPKAKQYDQDCDISS
LEAPTFTTLDRGPPAPMLRLSWDHPVNLIGEKVLSPRIHICDTCNKPILIYGRMIPCKHV
FCLWCARGEDRVCARCGERVARVEQIGLGTVFMCNYNINKTVCKRTYLSQRDLQAHIDHR
HMKVPGATGLPKEEMKEERLSHRDPRGEGRDTRTDPRGDIRQDPRAMSDPRVSKEGYEHR
DSYSSSQFSRQGSGQFGSNHGQSHQTAGNHQASSHHISVIPVMTTARTNLITVPLQDQPE
HSSHSSFQHSGPSHPTPPHPPPHMPPTHPPPTHSFTSPPPAHSQPPRSHPQPPPYSSSFS
TAYSTQPPQYTYPPNPAAPPPPSPNVPPPPYSNVTPAVPPPTTYVNRSQYDGQYSTAQWS
TPPPQTPPSHPPGPPLHHPPPPSAQSSQYYRKNF
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagaaaaataaaaggagaggaaaacatgcaatggcaactaacaccagaagc
acaagtggtaccaatggtaacccacgacagcggaccccccagaacaggggggatagccca
gccgatgacagtagccgaaaagatgatggggagtatgaggagcagcgacgcagccgcggc
cgggggaggggacgagggaggccaagaggacgagcacgaggacctcctaggggtctgcgt
gtcaacaagagaaataagatagagagtgaggaagaggaagaagaaccagctcctccgcct
gtagatgagaatgaacctcccaaagcaaaacagtatgaccaagattgcgacatatcatcg
cttgaggctccaaccttcaccacgctggacagaggacctcctgctcccatgcttcggctg
tcctgggaccatccggtcaacctcattggcgagaaggtcttgtccccacggatccatatc
tgcgacacctgcaataagcctatcctcatctacggaagaatgataccctgtaagcacgta
ttttgcctttggtgtgcccgtggggaagaccgtgtgtgtgcgagatgtggagagcgtgtg
gccagagtggagcagataggccttggaacggtattcatgtgcaactacaatataaataaa
actgtttgcaaacgcacatacttatctcagagggatctccaggctcacatagaccaccgg
cacatgaaagtgcctggggcaacaggtctgccaaaggaagagatgaaagaagagcgtttg
agccacagagacccaaggggagaaggcagggacacgagaactgatccgaggggagacatc
agacaagacccaagggctatgtcagatcccagggtgagcaaggaaggctacgaacacagg
gactcctattccagctctcagttctcccggcagggttcagggcagtttggttctaatcac
gggcagtctcaccaaacggcaggcaaccaccaggcatcctctcatcatatttcagtgatt
cctgtaatgacaacagccaggaccaatctcatcaccgtcccactacaggaccagccagaa
cactcgtcacactcctccttccaacattctgggccatcacatccaacaccaccacaccca
ccacctcacatgccccctacgcatcctcccccaactcactccttcaccagtccaccccca
gctcactctcagcctccccgttcccacccccaacccccaccttactcctcttcctttagc
acagcttatagtactcagcccccacagtatacataccctccaaacccagctgccccccca
ccccccagccccaatgtgccgcctccaccatactcaaatgtgacacctgctgttcctccc
ccaaccacttacgtcaacagatctcagtatgacgggcagtactccaccgcacagtggtct
actcctccaccacagacacctccttcacatccccctgggccccctctccaccaccctccc
ccaccttcagctcagtccagccaatattacaggaaaaatttctaa
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