Penaeus vannamei (Pacific white shrimp): 113827360
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Entry
113827360 CDS
T06111
Symbol
Vps16A
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04140
Autophagy - animal
pvm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113827360 (Vps16A)
04148 Efferocytosis
113827360 (Vps16A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113827360 (Vps16A)
Membrane trafficking [BR:
pvm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113827360 (Vps16A)
Hops complex
113827360 (Vps16A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
113827360
NCBI-ProteinID:
XP_069979872
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Position
7:39521168..39531279
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AA seq
831 aa
AA seq
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MAFISDWTQIGSDVFYRKHELYTMEWGGGINLGDFMVAAASYGGPIALTRDETKFTKTQQ
SGKPIIFVFSSSGRKISSFKWMSGYLLCLGWSRSEDLVCVQEDGAVSLYDMFGTYQHTFN
MGQEVKDTQVQSAQVFTSHRETGVAVLSKSNRVFMVSNIYEPRTRKYPDIPSGVVECWCV
IREERHTNVLVSQGNNLLLLNHLDQRPQALYPEWNEPGGCIVEMAVSNNSRHVALLSDTG
KLWIGSSDIRIKYCEYDVKSQVKPKQIAWCGTGAVVLLWDMTLEVVSVNGDATSYYLDST
SHLVQEPDGVRVLGSTAHDLLQKVPLVVTETLGIGSMAPGALLLEAAKGFQERSTRANDC
LAMIKDTLEEAVNHCLQAAQHEYRPQTQKMLLRAALFGKSFLPEINPDPCKKAIFTLRVL
NAVRDYRVGLPLTWNQLEHLTLPVLLDRLVFRRFFPLALQIASFLKMPESDGASRILAHW
ACYKVLQPSQKSDEQIAKEINSKLGYTPGISYTDIANRADQAGRKQLAIKLIEYECRAKE
QVLVLMRLGEDQTALRRALQSGDTDLIYTVLHHLRQKLSSGDFLMFIRNFPVAQSLHIRS
CRELDMEQLRDILVQEDDFHGQALLRIKEAYMSNRTDTRQASLQGAAELFRKAKNESACQ
MTEEQVKLVKWQVRLEDGQHKPYVNKSLYDTLHQLLIDGQIKEAEKLKTEFKIPERRYWW
SRVLAHSQAGHWEELSNFSKNKKNPIGFEPFVDACLKNGNKSEAQKYAMKVKDENKVTYL
IKCGLLEEAVKVAQEQRSALGLSEVLAACGSQHQALQTKIQVLLSDSSLRN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcattcatctctgactggacgcaaattggcagcgatgtgttttacagaaaacatgaa
ctctacacgatggaatggggaggggggattaacctgggggacttcatggttgccgcagca
tcttatgggggtcccatagctcttacacgagatgagaccaaatttaccaaaacacagcag
tcaggaaagcccatcattttcgtcttcagctcatcagggaggaaaatttcatcctttaag
tggatgagtggctacctgctgtgccttggttggtcacgcagcgaagacctggtgtgcgtg
caggaggatggcgctgtgtcactatatgacatgtttggcacttaccagcacaccttcaat
atgggccaggaagtcaaagatactcaggttcagagtgctcaagttttcaccagccaccga
gaaacaggagtggctgtgctgagcaagtcaaaccgcgtatttatggttagcaacatttat
gagcctcgcaccaggaagtatccggatattcccagtggtgtggtggagtgctggtgtgtg
attcgtgaagaaagacacacaaacgtcttagtcagccaaggaaacaatttgcttctcctc
aatcatctggatcagagacctcaggctttgtacccagaatggaatgagcccggaggatgc
attgtggagatggcagtttccaataactctcgtcatgtggctctgctgtctgacaccggc
aagctctggattggctcgtccgacatccgcatcaaatactgtgaatacgatgtgaaaagc
caagtgaagccaaagcagattgcgtggtgtggtacaggggctgtggtgctactatgggac
atgacgctagaagtagtcagcgttaatggtgatgccacgagctattacttagattctaca
tcacatctagtgcaggaaccagatggtgtgagagtgttaggaagtactgctcatgatctt
ctacagaaggtgccattggttgtgacagagaccttaggcattggctctatggctcctggg
gctctcctccttgaagcagccaaaggtttccaggagaggagcacaagagccaatgactgt
cttgcaatgattaaggacactctggaggaggcagttaaccactgtttacaagcagcgcaa
catgagtaccgaccacagactcagaaaatgctgcttcgagctgcattgtttggaaaaagc
ttcttgccagagattaacccagacccatgtaaaaaggcaatttttacactccgagtgctt
aatgcagttagggattacagagtaggtttacccctcacttggaaccagctagaacacctt
acccttcctgtgttattggaccggttggtgtttcgaagattcttccccctagcccttcag
attgcttcatttctcaagatgccagagtctgatggtgcctctcgcatactggcacactgg
gcttgctataaagtattacagccatcacagaaaagcgatgagcagatagcaaaagagata
aatagtaaattgggctatacgccagggatatcgtacactgacatcgctaatcgagcagac
caagcaggcaggaagcaacttgctataaagttgattgagtatgagtgcagagcaaaggaa
caggttttggtgctgatgagactgggtgaagaccagactgcgctgagacgagccctgcaa
agcggagatactgaccttatttatactgtgctccatcacctgcgtcagaaactctcatct
ggtgatttcttgatgttcatccggaatttccctgtggcccaatcgctccacatccgcagc
tgtcgggagctggacatggagcagctgcgtgatattttggtacaggaggatgacttccac
gggcaagctctgcttagaattaaagaagcttacatgtccaatagaacagatacaagacaa
gcctccctgcaaggtgcagcagagctcttcaggaaagcaaagaatgaatctgcgtgtcag
atgacggaggaacaagtgaagctggtcaaatggcaggtgagactagaagatggtcagcat
aagccttatgttaacaaatccctctatgatactctgcatcagctgttaatcgatggacaa
attaaagaagcagagaagttgaaaactgaattcaagataccagaaaggaggtattggtgg
tctagagtccttgctcactcacaggctggccactgggaagagctgtcaaatttctcaaag
aataagaagaatccaattgggtttgagccttttgtagatgcctgcttgaaaaatggaaac
aaaagtgaggcccagaagtatgcgatgaaggtaaaagatgaaaataaggtgacatatctc
attaaatgcggactcttagaggaggcagtgaaggtggcacaggagcagcgcagtgcattg
ggcttgagtgaggtcctggcagcatgtggctctcagcaccaagctctccagacgaaaatc
caggtgctgctcagcgactcctccttgagaaattga
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