Penaeus vannamei (Pacific white shrimp): 113827739
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Entry
113827739 CDS
T06111
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113827739
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113827739
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Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
113827739
NCBI-ProteinID:
XP_027236434
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All DBs
Position
8:42686731..42707453
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AA seq
721 aa
AA seq
DB search
MPKVKTGRIHGSYFPDYELRRRETGLGKTLGWDSGIRRSLYSSMIPSTFWDPIEHDPKTG
FTGHGGVFNLEFSPDGTYLVAACEQRAIMVFDPLSRRQIHYIPLAHENCVNGIKFLDSRV
FASCSDDHTVALWDVRNLKRRIRLLQGHSNWVKNIEYSAGDGILVTSGFDGKILGWDING
YTEDGLLSTELFSMQGLMRMRLSPDCSKLVMCTTGGYMVLVHNLSLEHLSEDLRNFKPNM
YRLMQLSNTPLPHATMFTNLFYRQRNRVEFISDFPPSNEAEVIHSLQVHPQGWCVLSRNT
SMEDSSEWSCVHDIQDLGVTACKDEDEDQDHHGDLEPYDDIPSTSETEAQNSSTFQNRPS
SANSSNNNSNSSTNSGSESGNVNGNLHLSLTFSPRVEIMLRHSPRDESDDGGGDGGGGGG
GEMAGGAGPARGGSSGSNVNAFATASSGSGVRVVDGAGIAVGGSAGGGGGGGGGIDIQLR
FTSMDVFEALEHIRERREEQRIRQGRQRAARTDSEASSSSGNNENSSGIPQSSSSQSPSP
ALQHLGRNRTFSVHRGRDFDNARENLGSGRTAANIIDSRNAFYIRTGTGNHRALLLLRPL
ENYPRYNQTVDPNHKIAKNISRLTHYIEEPNVGRGFIKELCFNSDGRLICSPYAHGVRLM
MFDQNCSELSTCVQDIPQTLYAVSTNNCHKNCVVSTKFSPTHCLLVSGCLNGKIVWHQPV
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagtgaagacaggaaggatccacgggagttactttcccgactatgagctcagg
cggagggagacgggcctgggcaagaccttaggctgggactccggcatcaggaggtccttg
tactcgtccatgatccccagcaccttctgggaccccatcgagcacgaccccaagacggga
ttcacaggccatggcggcgtcttcaacctcgagttctctccggatgggacctatctggtg
gcagcatgtgaacagcgagccatcatggtgtttgatccattgtccagacgacagatccat
tatatacctttagctcacgagaactgtgtcaatggtatcaagttcctcgactctcgcgtg
tttgcctcatgtagtgacgatcacacagtagccctttgggatgtgcgaaacctgaagagg
cgcattcgactgctccagggacacagcaactgggtgaagaacatagaatattctgctggg
gacggcattttggttacgtctggttttgatggcaagatacttggctgggatattaatggg
tacacagaggatggtctgctgtccactgaactgttcagcatgcaaggactcatgagaatg
cgcctaagtcccgattgcagcaagttggtcatgtgcaccactggcggctacatggtactt
gtgcacaacctcagtctggagcacctttcggaagatcttaggaactttaagcccaacatg
taccgattgatgcagttgtcgaacactccgttgccccacgccaccatgttcacaaacctg
ttctacagacagcggaacagagtggagttcatctcagacttccctccttccaatgaggcg
gaggtcatccactctctgcaagttcatccacagggttggtgtgtgttgtccagaaataca
tccatggaagattcatcagagtggagctgtgttcatgacatccaggacctaggagtgaca
gcttgcaaggatgaggatgaggatcaagaccaccatggagacctagaaccctatgatgac
attccctcaacaagtgagacggaagcacagaattcttcaacatttcagaatagaccaagc
agtgcaaacagtagtaataacaatagtaacagtagtacgaacagtggaagtgaaagtggc
aatgtaaatggaaacttacatttatcattgacgttcagcccaagggtggaaatcatgctg
cggcacagcccaagggatgagagtgatgatggtggtggtgatggaggtggagggggtggg
ggagagatggcaggtggagctggtcctgctaggggtggcagcagtggtagcaacgttaat
gcctttgctacagcctctagtgggagtggagtgagagttgtagatggtgcaggaatagca
gttggtggtagtgcaggaggaggaggtggaggagggggaggcatagacatccagctacga
tttacatcaatggatgtctttgaagccttagaacatataagggagcgccgtgaggaacaa
cggatacggcaaggaaggcagagagcagctcggactgattcagaggcctcctcaagtagt
ggaaacaatgaaaactcctctggtatcccccagtcctcttcctctcaatcaccatcacca
gccttacaacaccttggccgtaataggacctttagtgtgcacagagggagagattttgac
aatgccagagaaaatttgggctcgggaaggactgcagccaatattatcgactctcgtaat
gcattttatataagaactggtactggcaatcatagggctctgttgcttcttcgacccttg
gagaattatcctcgatataatcagacggtggatccaaaccataagattgcaaagaatatt
tcacggctaactcattatatagaggaaccaaatgttggaagagggtttatcaaggagctg
tgcttcaactcagatgggcggcttatatgctccccatatgctcatggggtgcggctcatg
atgtttgaccagaactgttcagaactctccacatgtgtgcaagatattccccaaaccctg
tatgctgtatccaccaacaattgtcacaaaaactgtgttgttagtaccaagttctctccc
acacattgccttctagtctcaggctgcctgaatggcaaaattgtgtggcatcagcctgtt
ctctag
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