Penaeus vannamei (Pacific white shrimp): 113827840
Help
Entry
113827840 CDS
T06111
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113827840
Membrane trafficking [BR:
pvm04131
]
Others
Specific organelles associated proteins
Auto phagosome
113827840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PB1
ARMET_N
NeA_P2
Motif
Other DBs
NCBI-GeneID:
113827840
NCBI-ProteinID:
XP_027236578
LinkDB
All DBs
Position
21:17577719..17617464
Genome browser
AA seq
790 aa
AA seq
DB search
MASPLTTVTPARDAVRIKVIQHSRYEVDSQCCRFSVDPGLTGYEVLRNLIARAFDLKGEF
QTCYLARDDRFPEACWVPMLSDFDLEMAFVKSSDPYLLVKVEILSSNGTWDAVTNMDIPK
LSLPDLPRNNYSTKLPGLFKEKMEKTLSIVQKALNWNDEAGDEASLRPPRPPLTDSEFQN
MLNRVGQLAQPKELRLCVYLGGLEPSLRKVVWKHLLNVYPEGLTGRERLDYMKKKTQEYE
SLKNVWQEHMKNEEKQISEEVKYVTNMVRKDVLRTDRHHTYFSGPDDNSNVQSLYNILTT
YALNHPSVGYCQGMSDLASPLLVTMRDEAQAYVCFCALMARVHSNFHIDGDAMTLKFQHL
TEALIFYDLEYFTYLQLHQADDLLFCYRWLLLELKREFAFDDALHMLEVLWSSLPPDPPA
ESLPLYEVLFNPVQEPEVPLPPPTPRQNHYANVCALRRQRSCVSNRSAECLAAILSRRAA
SVDCDGADGSVGGKRLSRTWSQPIDTSHLRTRIPSGEAGINVDRIREENTSPEDSPTRNV
RKIRNLREFQLLTKNRDSDTESNPGSPSKDSKNTPTRKKSEAAKQISGDMKASNKSRRCF
SDSDADVGVPVYSDGGEVDVWQNPVATLSPETDQQLQIICQEEQPSVVQQLKPKTNGQHQ
TSEKTEENDTSMNISVNSCEEVTEVTGWQVTMSSGENHVPTMPPPEEFGGGNPFLMFLCL
TLLLQHREHIMQNNMDHNELAMHFDKMVRQHNVHKVLAQARRMFEAYLKLDFSKARSKNT
PPSSVGDQSC
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccattgacaacagtgaccccagctagggatgcagtgagaattaaagtaatt
cagcatagcagatatgaagttgattcccagtgttgtcgcttcagtgttgacccaggactc
actggctatgaggtcttgcggaatctcattgcacgagcatttgatctaaagggtgagttc
cagacttgctacttggctcgtgatgacagatttccagaagcgtgttgggtcccgatgctg
tctgattttgatttggaaatggcctttgtcaagtcttcggacccttaccttttagtaaaa
gtggaaatcttatcctcaaatggcacatgggatgctgtcaccaacatggacattccaaag
ctttccttacctgatcttcctcgaaataattattcaactaagctcccaggattgtttaaa
gaaaagatggaaaagactctatctatagtacagaaagccttaaattggaatgatgaggct
ggtgatgaagcttccttgagaccaccccgccctcctctgactgacagcgaatttcaaaat
atgctgaatcgtgtgggtcagttggctcaaccaaaagaattgcgattatgtgtttacctt
gggggcctggaaccttccctaagaaaagtggtgtggaaacacctgctaaatgtgtatcca
gaagggcttacgggacgtgaaaggctggactacatgaaaaagaagacacaggagtatgaa
agccttaaaaatgtctggcaggagcatatgaagaatgaagagaagcagataagtgaggaa
gtgaagtatgtcaccaatatggttcgtaaggacgtcttgcgcactgaccgtcaccacact
tacttcagtggacctgatgacaacagcaatgtgcaatctctctataatattttaaccacg
tatgctctgaatcatccttctgttggttattgtcaagggatgagtgacttggcttctcct
ctcttagtcactatgcgtgatgaagcacaagcctatgtgtgtttttgtgccctcatggcc
cgagtgcattccaatttccacatagatggagatgctatgactctgaagttccagcacctt
acagaagctctcattttttatgacttggaatattttacataccttcagctgcatcaggct
gatgacttgctattttgctatcgatggctgctgctggagttgaagcgagagtttgcattt
gatgatgctctacacatgctggaggttctgtggagttctcttcctccagatccaccagca
gaatctcttccactttatgaggttttatttaatcctgttcaagaaccggaggtcccactt
ccaccaccaacaccaagacagaaccattatgccaatgtatgtgccctaagacgtcagagg
tcatgtgtttcaaacagaagtgctgagtgccttgctgccatacttagtagaagggcggct
agtgttgactgtgatggtgcagatggtagtgtaggtgggaagagactaagtcgaacatgg
tctcaacccattgacacatctcacctacgaacaagaatacctagtggcgaggcaggcatt
aatgttgatagaatcagagaggaaaacacatctccagaagatagtcctactaggaatgtt
agaaaaattagaaatctaagagagttccagcttctaacaaaaaatagagactcagatact
gaaagtaatcctggctcaccaagcaaggattccaagaatactcccacgagaaaaaaaagt
gaggcagctaaacaaatatcaggagacatgaaagccagcaataagtccagaaggtgtttc
tcagattctgatgcagatgttggcgtaccagtttactcagatggtggggaagttgatgtt
tggcagaatcctgtggcaacactctcaccagagactgaccaacaattacagataatatgt
caagaggagcagccatctgtggtacagcagctaaaaccaaagactaatggccagcatcaa
acttcagaaaagacagaggagaatgacacttcaatgaatatcagtgtcaattcttgtgag
gaggtgacagaagttactggatggcaagtaaccatgagctctggtgagaatcatgtgccg
acaatgccaccccctgaggagtttggtggtggtaatccttttctcatgttcctgtgcctg
actcttctcttgcagcaccgcgagcacatcatgcaaaataatatggaccacaatgaattg
gcaatgcactttgacaagatggttcggcaacacaatgtgcataaggtactagctcaggca
cgccgtatgtttgaagcataccttaaattagatttttccaaagcacgctctaagaatact
cctccaagttctgtaggcgaccaatcttgttaa
DBGET
integrated database retrieval system
