Penaeus vannamei (Pacific white shrimp): 113827844
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Entry
113827844 CDS
T06111
Symbol
l(2)dtl
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113827844 (l(2)dtl)
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113827844 (l(2)dtl)
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
113827844
NCBI-ProteinID:
XP_027236579
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Position
12:37750125..37755960
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AA seq
774 aa
AA seq
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MLSKFTGHVVKEWVFENIYGRRSSQVKKAQKSLFAWSFKCYQEDEYDGIATAVDETNGQA
PPEPPIYACKFGEGPQYGHILVLANEDGKIGLRDTRQKGNQAAIEAHQIHNNAIFDVCWV
PGTPELVSVSGDQTAIVLRVKEDGALEPVLTLMGHSRSVKTVHVNPFDPYVIATGARDGS
VIIWDKRCKPHHRADEIAPAHHSLTNRSIASPSMRKVATGGSLANNSVTGVVFQQQHTLI
SSGASDGLIKLWDLRKTHSGGRREPQCQSLLEHSGNSSHRGFTSLSVSPERDVLYTSCMD
NVIYAYHLANPTPKPVAEYRGHVNLTYYVKSCLSPCGSYLLSGSSDNHAYIWLTEKPGRP
IARLTGHFAEVTSVGWCPVDDEKLVTCADDMKLRVFQRRNTNLEDFDERMKLRGLAEVYT
VEHAKSDIAEPSESSGNEPQDPLPPLPITPSTSRLHASTSATPSSMRGREGPSSMQSPQS
HPMTPRQQTPHHRSRGRGTPCTPKTSERNTLLHWLAVTKTPGPQESPSTSGAAPVSASKK
AGLKRKLTDLMGEDQENISGEDKKKSPNSPKKNVLCPSSAQNFPCSPQPSVAKMLKYGDD
ARAHVSLKQEGGEGFTEMSESIKPIEAQDKVALDGGFRKPVTNIVNHSLENVKEESTSCP
GEQLAKAPKMAENAVKNKSHFSPSAFRFRHLSSPTANLPNYVVDGSSPHNRPEVRVEKKK
NTDWLTSFSHQRKLKFTRTPDKVERKHASGFSSHVKKKEKKVLHIKQKYQKLNL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaaattcaccggacacgttgtaaaggaatgggtttttgagaatatatacggc
agacgttcaagtcaggtgaagaaagcgcaaaaaagcctctttgcttggagtttcaagtgt
taccaagaggatgaatacgatggcattgcaacagctgttgatgaaaccaatggccaggca
cctccagagccccccatttatgcatgcaagtttggagaaggaccgcagtatgggcacata
ttggtgctggccaacgaggatggaaaaattgggctgagagacacgagacagaaggggaac
caggctgcaattgaagctcatcagatacacaacaatgcaatatttgatgtgtgctgggtg
ccaggtaccccagagctggtgtctgtctctggagatcagactgccattgttctgagggtg
aaagaagatggtgcactggagccagtccttacgctgatgggacactcacgatcggttaag
actgtccatgttaatccttttgatccatatgtgatagcaactggtgcacgagatgggagt
gtgatcatttgggacaaacggtgcaaaccacaccatcgtgcagatgaaatagcccctgcc
catcacagcctgacaaacagaagtattgcttctcctagcatgcggaaagttgccacaggg
ggatcactggctaacaacagtgttacaggagttgtttttcagcaacagcatacacttatt
tcatccggagcatctgatggattgatcaagctgtgggacctgcggaagacacacagcgga
gggaggcgagaacctcagtgccaaagcctcctagaacacagtggcaactcctctcatcgg
ggattcacttccttatctgtatcgccagaaagagacgtactttacacatcctgtatggac
aatgtaatctatgcataccatttagcaaacccaacaccaaagccagttgctgaatataga
gggcatgtaaacctcacctactatgtcaagtcttgcctaagtccatgcgggtcctacctt
ttaagtggttcaagtgataaccatgcttacatttggctcacagagaagcctgggagacct
attgcaagacttacagggcattttgcagaggtcacatcggtgggatggtgtccagttgat
gatgagaagttggtgacatgtgcggatgatatgaagcttagagtcttccagcgtagaaac
acaaacctagaagattttgatgaaagaatgaagcttcgaggattggctgaagtatacaca
gtagaacacgccaaaagtgacattgcagagcccagtgagagctcagggaatgaaccacag
gatcccctccctcccctgcccatcaccccaagtacatctcgtcttcatgcttccacttca
gccacgccctcaagcatgagagggagagaaggaccatctagcatgcagtctcctcagagt
catccaatgacacccagacaacaaacaccacaccatcgatctcgaggcagaggtacacct
tgcacaccaaaaacaagtgagaggaatacacttttacactggctagcagtcacaaagact
ccagggccccaagaatcgccgagtacttcaggagctgcaccagtaagcgcaagcaaaaag
gctgggttgaaacgcaagctaactgacctcatgggggaagaccaggagaatatcagtggc
gaggacaagaaaaagtccccaaattcccctaagaaaaatgtgctgtgtccatcatctgca
cagaacttcccttgttctccccagccaagtgtggccaaaatgctcaagtatggagatgat
gcaagagctcatgtctccttgaaacaagaaggcggtgaaggctttacagaaatgagtgaa
agtatcaagcccatagaagctcaggataaagtagctcttgatggaggattcaggaagcct
gtgacaaatatagtgaaccactcgctggaaaacgtgaaggaagaaagtaccagttgccct
ggagagcagcttgctaaggctccaaaaatggccgaaaatgcggtaaagaacaagagccac
ttttccccctcagcattcagattcaggcatctctcatccccaacagccaacctgccaaat
tatgtggtggatggctcctcccctcacaaccgacctgaagtacgagtggagaagaaaaag
aacactgattggctaacatcctttagtcaccagaggaaactaaagtttacaagaacacct
gacaaagttgagagaaagcatgcctcagggttctcttctcatgttaaaaagaaggaaaag
aaggtccttcatataaaacaaaaatatcagaaacttaacctgtga
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