Penaeus vannamei (Pacific white shrimp): 113828122
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Entry
113828122 CDS
T06111
Symbol
Cdep
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
RA_2
PH_20
Motif
Other DBs
NCBI-GeneID:
113828122
NCBI-ProteinID:
XP_069990858
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Position
20:complement(4784473..5169703)
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AA seq
1102 aa
AA seq
DB search
MAGADSSGVGGGGRSMGGSGPVDGGGVRTPPTTPKKVGGKMLAVKILMLDDTYTLFQIQS
KACASVLLEQVCRQLNLLESDYFGLEYTDGNTRYWLDLEKPMNRQVCLSQVEPVLRFCVK
FYTPDPAQLEEEYTRYLFALQIKRDLAHGWLMCNDNTAALMASYIVQAECGDFVDEDYPD
HRYLSLYKFVPSQDGELERKIMENHKKHVGMTPAAADLNLLETARRCELYGIKMHPAKDH
EGVPLNLAVAHMGVLVFQNYTKINTFSWAKIRKLSFKRKRFLIKLHPEGYGYYKDIVEFF
FDGRNECKNFWKKCVEHHGFFRCSQVKKVPRQKTRVLSRGSSFRYSGRTQKQVQEFVRDN
YVKRAPFQRSQSFRHSPSVHTSVSNVGMSISAQPLLPLGDNQCVGTPVSLSCGSMTLAST
GDPQSPGSPTQTETADLHDFDTRDLETPSVTPSRQDTLSPETSVTSSPQRGHDPEYSHHP
VTNSTQVQTGVSPAEVTPPKVNDAASVLPSHSLASPIGLSPDEPVVSSPSINASPVTSPL
STQKENIPMSNHVNNRVDSIPNGHDKSVTAARVGEMEGESRKRKYPSDKAYFIAKEILTT
ERTYKKDLEVINMWLREEVGKEEGMPTDILNQLFQLIDPIYEFHTQFLKELDTRLALWDG
RASGSNKLESQRVGDIMLKNMNMLELYDKYLKSHYSILEGLEASFRKNRRFEQVYRDFEM
QKVCYLPLTSFILKPLHRLQHYHLLLDRLVKHYGSANHHDYRECMTAKAKLSQAVKGMGP
ALAASENLVKLVELQRDLVGIDNLVQPGREFLREGCLQKLSRKGYQQRMFFLFNDVLLYT
NRTTTPVLQFKVHGQLPLRGVMVEETESRMGATNCFTIYGGNRALMVAANSDEDKAKWLE
DLTAAISQAKSRPDDAFHYLSLKSISSSDEVLDRSESSTLEDPLSPTRGLGEKGASPQQR
SNTTVHVCWHRATSVAARDYSLAVQNQLSGYLLRKFKNSMGWQKLWVVFTNFCLFFYKTF
QDDFPLASLPLLGYTITTPGEDDQIQKEFVFKLQFKNHVYFFRAESEFTFSRWMEVISTA
TQNSARTRLFSRKESENESIRL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctgacagtagcggcgtgggcggcggtgggcgctccatgggcgggagcggc
ccggtggacggtgggggcgtcagaaccccgcccaccacgcccaagaaggtgggcggcaag
atgctggcagtgaagatcctcatgctggacgacacctacacactcttccagatacagagc
aaagcgtgcgcctcggtgctcctcgaacaggtgtgtcgccagctcaacctcctcgagtcg
gactacttcggcctcgagtacacggacggcaacacccgctactggcttgacctcgagaaa
cccatgaatcgacaggtgtgtctgagccaggtagaaccagtgctgaggttctgcgtcaag
ttctacacccctgaccccgcccagctggaggaggagtacacacgctacctctttgccctc
cagatcaaacgagacttagcgcatggctggctcatgtgcaacgacaatactgccgccctt
atggcatcctacattgtccaagcggaatgtggagactttgtggatgaagactatcccgat
caccgttacctctccctgtacaagtttgtgccctcacaagatggtgaattggagagaaaa
atcatggagaatcacaagaaacatgtaggtatgactccagctgctgctgacttgaacctt
ctggaaacagctagaagatgtgagctctatggcatcaagatgcatcctgctaaggatcat
gaaggagtaccattaaaccttgctgtagcgcacatgggtgtgttagtgttccagaactac
acgaagatcaacactttttcttgggccaaaatacgtaaactctccttcaagcgtaagcgc
tttctcatcaaattacatccagaaggatatggctattacaaggacattgtggaatttttc
tttgatggacgtaacgagtgcaagaatttctggaagaagtgtgtggagcaccatggattc
ttccgatgttcacaagttaagaaagtgccacgccaaaaaaccagggtgctttcgcgagga
tcttcatttagatacagcggcagaactcaaaaacaggttcaggaatttgtcagagataat
tatgtgaagagagcaccatttcaaaggtctcagtcatttcgacactctccctcagtacat
acgagcgtgagcaacgtaggtatgagtatctctgcacagcctcttcttccacttggagac
aatcaatgcgttggcacacctgtatctttatcgtgtggctccatgaccctggcttctaca
ggtgacccacagtcgccggggtcacctacccagactgagactgccgacctccatgacttc
gacacacgtgacctggagacccccagtgtgacaccatcaaggcaggacaccctatcaccg
gagacctcagtgacctctagtccacagcgaggtcatgaccccgagtactcccaccatcca
gtcaccaattctactcaagtgcaaacgggagtctcaccagcagaggtgacaccacctaag
gtcaatgatgcagcctcagtactgccgtcacacagcctagcctcccccattgggctgagc
ccagatgagccagtcgtcagctcgccgtccatcaatgcctctcctgtgacttcacccctg
tcaacgcagaaggaaaatatacccatgtctaatcatgttaataacagggtggactccatt
cctaatgggcatgacaagtcagttacagctgcacgtgttggagaaatggaaggagaatca
aggaagagaaagtatccgagtgacaaggcctatttcatagccaaagaaattctaacaaca
gagagaacttataaaaaagatctagaggtcattaatatgtggttacgagaagaagttgga
aaggaggaagggatgccgacagacatccttaatcaactcttccagctgattgacccaatc
tatgagttccacacacagttcttgaaggagctggacacacgtttagcattatgggatggt
cgtgcaagtggatcgaacaagttggaatctcagagagtgggcgatattatgctgaaaaac
atgaatatgctagagttgtatgacaaataccttaagagccactactcaatattggaaggc
ctagaagcttccttccgtaagaaccgacgctttgagcaagtctatcgagactttgaaatg
cagaaagtctgctatttgccactgacgtcatttatcttgaaacctctccatcgtctccag
cattatcacttactgcttgaccgacttgtaaaacattatggcagtgctaatcatcatgac
taccgtgagtgcatgacagccaaagccaagttgagtcaagctgtgaaaggcatgggacca
gcactcgctgcctctgagaaccttgtcaagctggtagagctgcagcgagatctggtggga
atagacaatttagtacaacctgggcgagaattcttgcgagaaggttgcctacaaaagttg
tctcggaaaggataccagcagcgcatgttcttcctgttcaacgatgtcttgttgtacaca
aatcgcaccacaaccccagtgttgcaatttaaggtgcatggccaactccctctccgagga
gtaatggttgaagaaacagaaagccgaatgggagcaactaactgtttcacaatctatgga
ggcaacagggcattaatggtggctgcaaacagtgatgaggataaagctaaatggctggaa
gatctcactgcagccatcagtcaggctaagtcacggcctgatgatgccttccattatcta
tcacttaagtccatcagttcctctgatgaagttctggatcgcagtgaaagcagcacactt
gaggatcctttgagtccaactcgaggacttggagagaaaggtgcatctcctcagcagcga
tccaataccaccgtccatgtttgttggcaccgtgccaccagtgtggcggcaagagattac
tctctagctgtgcagaaccaactcagtgggtacttgctacgcaagttcaagaacagcatg
ggctggcagaagctttgggtggtattcaccaacttctgcctgttcttctataagaccttc
caggatgatttccctctggcttcacttccattgcttgggtacactataactactcctgga
gaagatgaccaaatacagaaggagtttgtctttaagctccagtttaagaaccatgtttat
ttcttcagagcggaatccgaattcactttctcccgctggatggaagtaatttctacagct
actcagaactcagcacggactcgtctctttagccggaaagagagtgaaaatgagagcatt
aggttgtaa
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integrated database retrieval system
