Penaeus vannamei (Pacific white shrimp): 113828337
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Entry
113828337 CDS
T06111
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X2
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113828337
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvm01002
]
113828337
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113828337
03036 Chromosome and associated proteins [BR:
pvm03036
]
113828337
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113828337
Peptidases and inhibitors [BR:
pvm01002
]
Metallo peptidases
Family M67
113828337
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113828337
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
113828337
BRISC complex
113828337
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
113828337
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
113828337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Zn_peptidase
HTH_animal
Motif
Other DBs
NCBI-GeneID:
113828337
NCBI-ProteinID:
XP_027237077
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All DBs
Position
32:6094399..6103851
Genome browser
AA seq
271 aa
AA seq
DB search
MWVSSVRLAADAYLVCLHHALTTEKEEVMGLLVGQFSEGNEVTCDIYSAVTLRRSDKRKD
RVEISPEMLIEAQQKAEQMSASSGQELHIVGWYHSHPHITVWPSDIDLQTQAGYQQMDSR
FIGLIFSVYNEDKKTKVGSHQVTCFQATNQSPEGEAPQYVRLPVPLEIQPTPNLATNNQQ
ALENLCATLFDEQSEVLELSRQRSPQYPLAHLHNAAVMVRSVCGLSSLVSGPLVCTMEER
LHHIRGTTQHLKQEAEYLKNLLLENEIKVPL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtcgagtgtaagattggctgccgatgcttaccttgtgtgtcttcatcatgcc
ctcacaacagagaaggaagaagtgatgggactgcttgttggacaattcagtgagggcaat
gaagtgacctgtgatatttattcagctgttacactgagaagatcagataaaagaaaagac
cgtgtggaaatatcgcccgaaatgctgattgaggcgcagcaaaaagccgagcaaatgtca
gcttccagcggacaggaactccacattgtgggctggtatcactctcatccacacatcaca
gtttggccctctgacatagatttgcaaacccaggcaggataccaacaaatggacagcaga
ttcattggccttattttctcagtttacaatgaggataagaaaaccaaggtaggaagccat
caggtaacctgcttccaagcaaccaaccagagtccagagggagaggctcctcagtacgtg
cgattaccggtccccttggagattcagccaaccccaaatttagccactaacaaccaacag
gccctggagaacttgtgtgcaacactttttgatgagcaaagtgaagtgctagagttgtca
agacagcggtctccccaatacccacttgctcacttacacaatgcagctgtgatggttcgc
agtgtttgtggccttagtagccttgtgtcaggtcctcttgtttgcacgatggaggaacga
ttacaccacataagaggcactacgcagcatctcaaacaagaagcagagtacttaaagaac
ctccttctggaaaatgaaatcaaagttcctctttaa
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