Penaeus vannamei (Pacific white shrimp): 113828357
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Entry
113828357 CDS
T06111
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113828357
Enzymes [BR:
pvm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
113828357
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113828357
Prokaryotic type
113828357
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
113828357
NCBI-ProteinID:
XP_027237103
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All DBs
Position
10:45415061..45422404
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AA seq
268 aa
AA seq
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MKPVVLAQMNTRKIIRRLNGVFPIAKPHGITSAEALNTIKQKLYEELEIHKSGDIKLGHG
GTLDSTATGVMAVGVGDGCKKLKCLLQGDKNYRVQCQLGIATDTYNETGKVMAEMAYDHV
TEELLRDSLREFQGRIKQVPPLYSALKMNGRRYSDLAREGIEITIEPRRVFCYEVHLTSF
TPPYFGLFVSTGPGFYIRSLIHDLGQAVGSCAHVRQLQRTKHGPFSLSDALPEDKWNAEQ
IIQSVTRFKNIVDKYYKEYKMAAWKDKW
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagtggtcttagcacaaatgaacaccagaaagattatacggagattaaatgga
gtgtttcccatcgcaaaacctcacgggatcacatcagctgaagctctgaacacaataaaa
caaaaactttatgaagagctcgagatacacaagtctggcgacattaaacttggccatgga
ggaaccttggactcaacagcgacaggggttatggctgtcggtgttggagacggctgtaag
aaactgaagtgtctgttgcaaggtgacaagaactaccgggtgcagtgtcagcttgggatt
gcaacggatacatacaatgagactgggaaagtaatggcggaaatggcctatgatcatgta
acagaggaattgttaagagatagtttaagggaatttcaagggagaatcaagcaggtgcca
cccctctattcagctttaaaaatgaatggaagaagatattcagatctagcaagagaaggt
attgagattaccatagaacccaggagagtgttttgctatgaagtacatctgacctccttc
actcctccgtactttggcttgtttgtgtcaacaggtccaggtttttacattcgaagtcta
attcatgacctgggacaagctgttggttcctgtgcacatgttcggcaactccagagaacc
aagcatggtccgttctctctcagcgatgctttacctgaggataaatggaatgctgagcag
ataatccagtcagtaaccagatttaagaatattgttgataagtactataaagagtataaa
atggctgcttggaaagataagtggtaa
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