Penaeus vannamei (Pacific white shrimp): 113828417
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Entry
113828417 CDS
T06111
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113828417 (Vps53)
Membrane trafficking [BR:
pvm04131
]
Protein recycling
Others
EARP complex
113828417 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
113828417 (Vps53)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
HAUS1
Syndetin_C
RINT1_TIP1
CEP128
DUF2009
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
113828417
NCBI-ProteinID:
XP_027237185
LinkDB
All DBs
Position
15:4494934..4506320
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AA seq
852 aa
AA seq
DB search
MEPDNLIEVEKLNLNFPPEVVQAIQEILPSDDPFDSPEFNTVEYINNRFPAEQSLHHIDD
VLEEMRLKITSTDDQIRTVIRSLTNVDQDGRASLLNAQEAIAELFARFQDIKERAGESEQ
RVKEITRDIKQLDTAKKNLTTSITTLNHLQMLVEGVQKLQALKARREYGEIATLLQGVMN
VLEHLNRYKHIPQVADLARQVEQIRGELEKQILEDFHRAFHGPNARRFAPTKELAEACLV
VSELDPKVKKTIIEDVIKTQLAEYEVLFAGGESDAWLTKVDLRRKWLLKTAVEFEKTLAA
MFPPSWQVPARLALAFCEVTRSQLSHAMELRPQDIDVGTLLHAHKIMSELESLLVRKYTS
FQPHDRTPKSSVSTNPFVEDEQSSKTENTNPFEEAASTVETLVSPFSGAVCRCFQPYLKI
YIESMDKRLNEQIEKFANDMKSYKFEHIDAEESNVVPCCGELFTIYKNVLVEFLRLGPGE
SMGGLVEVLQKHLREFCTKVLRAALPKVGANIPMPKDINMKELTAVLAQVQTLWREGDTP
KLSEDDVRRVCSVLVSAEYCEEMTGRLEAKLKERSLPSLVHSISLTHEQDLFHAVLAQCI
ALLVAHEESLCDPALSSMTKINWMMEQTGDQSPYVTAISQHISSSIPLIRHNLHTSRKYF
TRFCDKLAAAILNKFVQQVYKCRPINSVGCEQLLLDCHALKAVMLQLPVVALQMRRDPPQ
TYTRMVGRGMARAELVLQVVMGEYATHNDLVDKFIRLLPDATIADFQKVLEMRGVKDRAS
VLELYRQRTLGNSTESPHRAQVSPGSSSQVAAQIPPSQASPVVSSTANSSPEHEMSKIAR
LERMLKSRRLIS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgataatttaatagaagtggaaaaactcaacctcaatttccctccagaagtt
gtacaagccatccaagagattcttcccagcgatgacccgtttgattcaccagagttcaat
acagtggaatacatcaacaaccgctttccagcagaacaatcactccatcacatagatgat
gtgttggaagagatgcgactgaagatcacttccacggatgaccagatcagaactgtcatc
cggtcactaactaatgtggatcaggatggaagagcatcacttttaaatgcacaagaggcc
attgcggaattatttgcacgcttccaggatattaaggaaagagcaggagaatctgagcag
agagtaaaggagattacgcgtgacataaaacagctggacacagccaagaagaatctcacg
acctctatcactacactcaatcaccttcagatgttagtagaaggagttcaaaaattacaa
gcactaaaggctagaagagaatatggagagattgcaactctgttgcaaggagtgatgaat
gtccttgaacacctcaatcgttataaacacattccacaagtggcagacttagcccggcag
gttgaacaaatcagaggagagcttgagaagcagattttggaagatttccacagagccttt
catggaccaaatgctcgtcgttttgctccaacaaaggagttggcagaagcctgccttgtg
gtttcagaactagatcccaaagtcaagaaaaccatcattgaggatgtcatcaagacacaa
ttagctgaatacgaagtgctctttgctggaggagagagtgatgcttggttaacaaaggta
gacctaaggcgcaagtggctcctgaaaacagcggtggagtttgagaagacccttgctgca
atgttccctccatcttggcaggtaccagcacgtttagcactagcattttgtgaggtcaca
agatctcagctgtctcatgcaatggagttgagaccacaggacattgatgttggcacattg
ctacatgctcacaagatcatgtctgagcttgaaagcctccttgtgagaaaatacaccagc
ttccagcctcatgaccgcaccccaaagtcgtccgtgtctaccaatccttttgtggaggat
gagcagtccagcaaaacagaaaatacaaacccattcgaggaggctgcatccacagtagag
acgctagtttcacccttcagtggagcagtgtgccgttgcttccagccttacctcaagatt
tatatagaaagcatggacaagagactgaatgaacagattgagaagtttgccaatgatatg
aagagttacaagtttgaacacattgatgcagaggaatctaatgttgtaccttgctgtgga
gagctgttcaccatatacaaaaatgtccttgttgaatttctccgccttggtcctggagag
agtatgggaggattggttgaagtattacagaaacatctgcgggaattctgcaccaaagtg
cttagggcagcacttccaaaggttggagcaaacatcccaatgcctaaggacattaacatg
aaggagctcactgctgtgttggcacaagtccagacactatggcgtgaaggcgacactcca
aagctgagtgaggatgatgtacgaagagtgtgctcagtgcttgtgtcagctgagtactgt
gaagagatgacaggaaggttggaggccaagttgaaggagagaagtctgccttcattagtg
cactccatcagccttacccatgaacaggacttgttccatgcagtgctggctcagtgtata
gccctccttgtggctcacgaggagagcctttgtgaccctgctctatcctccatgaccaag
atcaattggatgatggagcagacgggtgaccagagcccttatgttacagccatctcccag
cacatttcatcatccattcctctgatccggcacaaccttcacacttcccgaaaatacttc
acaagattttgtgacaagttagcagctgcaattctgaacaaatttgtccaacaggtatac
aagtgccgtccaattaatagcgttgggtgtgagcagttacttcttgactgccatgcactt
aaggctgtcatgttacagttacctgttgtagcattgcagatgcggcgtgaccctccccag
acatacacgcgaatggttggcagaggaatggcacgagcagaattggtactgcaggttgtg
atgggtgaatatgcaactcacaatgaccttgttgataagttcatccgtttactacctgac
gcaacaattgcagacttccagaaggtactagagatgagaggtgtaaaggaccgtgcctca
gtgctagagctctaccgacaacggaccctcggaaattcaacagaatctcctcaccgagca
caagtttcaccaggcagcagcagccaagtagcagcacaaatcccacccagccaagcctca
cctgtggtcagctcaacagccaactcaagcccagagcacgagatgagcaagattgcacgg
ctagagaggatgctgaagtcgcgcagactgatatcctaa
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