Penaeus vannamei (Pacific white shrimp): 113828508
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Entry
113828508 CDS
T06111
Name
(RefSeq) transcription factor Sox-3
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113828508
Transcription factors [BR:
pvm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113828508
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chorion_1
Motif
Other DBs
NCBI-GeneID:
113828508
NCBI-ProteinID:
XP_069980749
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All DBs
Position
8:complement(38271813..38283771)
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AA seq
231 aa
AA seq
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MKKDKYPLASGLLPTDPTRPPVQQVTRDMYNMTNGYMPNGDYGDYGYGYDSAAYGGQGYP
YMTGQVYGGYDMTRGYSPTSTSTPSYMNGSYSSAMYASAPSPYSMSQMASMASVGSVGSV
GSSASHSPTPIKSETPTLPVSSPGASMPPSASHTTPGDYPTSVMKREYAPGQPGQQDLSQ
MISMYLPGSQERHEQQKAAAAAAYMSHAHYHAHAATSPEQMPPAPMPLTHM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggacaagtaccccttagcctcgggtctcctccccactgaccccacgcgaccc
ccagtgcagcaggtgacccgggatatgtacaacatgaccaacgggtacatgccgaacggg
gattatggcgactatggctacgggtacgacagcgccgcatacgggggtcaaggctacccg
tacatgacaggtcaggtgtacggcgggtatgacatgacccgtggctactctccgacctcg
acctcgaccccgtcttacatgaacgggtcgtacagttcggctatgtacgcctcagcaccg
tctccctattccatgagtcaaatggcttcgatggcatccgtaggttccgtcggttccgtg
ggttcttcggcgtcccactcccccacgcccataaagtctgagacgcccaccctcccagtc
tcgtctcctggagcctccatgccaccctcagctagccacaccacaccaggtgattatcca
acgagcgtgatgaagcgggagtacgcgccaggccagccgggccagcaggacctctcgcag
atgatctccatgtacctgccggggtcccaggagcgccatgagcagcagaaggccgccgcc
gccgccgcctacatgtcccacgcacactaccacgcccacgccgcgacttcccccgagcag
atgccgcccgcacccatgcctctcacccacatgtaa
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