Penaeus vannamei (Pacific white shrimp): 113828592
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Entry
113828592 CDS
T06111
Symbol
obe
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113828592 (obe)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113828592 (obe)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113828592 (obe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
113828592
NCBI-ProteinID:
XP_069969739
LinkDB
All DBs
Position
34:755510..790512
Genome browser
AA seq
2196 aa
AA seq
DB search
MAPHGGRPVGPPRLTSFLRAYANVSRKGNEDDYDLAQILAIKREQRRQRMKESGVTWPRI
KNQVEHLGRENGVNLDCYLREAAEVARQVAPELDTRDEAATLLFTVSHDHAVLPVKHKLK
LHQMFGDVKPYLLERAHKAVRNVADLVGEEELKEMMQNLQNDQETTTMFGANIKVGKLGP
PPELPPMDKLINLQKVKVESKATLRYDDYKPETVQTQVKKKVIKDTYDKSWVEAEMLKYY
TDTSIVSELSSGTMALLISSKGDDELQNEMFELLGFERFELIQTLLQHRNEIKNPPPDKD
VKIAELLSDLEKRGIPERPIFGQQVTVMNETEKQYLKQARKEEKKLLKTAKQIAEDDSID
DFSPETLKAKREAALLEASQAYLFKKRDRVNVPEIRFPYVFDSQNKAKQTAGYIAGMKIA
LPEGFTRTYDDVLEEVDIPMSDPAPPEVGANLINVKELDEIGRIAFKGCKTLNRIQTVVY
PSAYHSNDNLLICAPTGAGKTNIAMLTVVHQIRQHIENDVIQRDKFKIVYIAPMKALAAE
MARNFGKRLEPLGITVKELTGDMHLTKPEIMATNMIITTPEKWDVTTRKPGDTQLSQLVK
LLIIDEVHLLHGDRGPVLETLVARTLRMVESQQSMIRIVGLSATLPNYIDVATFLRVNPY
KGLFFFDGRFRPVPLGLTFIGIKALGRFKQMEDMDRVTYEKCLHFIKQGHQVMVFVHARN
GTLRTAENLIKIAQEMGKTEDFLPDDGPELANARKDMARSRNKKLLELFDSGFGVHHAGL
LRADRAAIENVFSQGMIKVLVCTATLAWGVNLPAHAVIIKGTDIYDSKHGTMVDLGILDV
LQIFGRAGRPQFDKNGHGTIITTHDKLAHYLSLLTNQYPIESSFIKHLADNLNAEVSLGN
VTNMEEAIEWMSYTYLHVRMRKNPQVYGLLYKDAQQDPNLEMFRRELLTTAARALDKARM
VRFDDATGFMHITDLGRIASQFYIKYDTVEIFNEFLKSVMNEGDILAVISQSSEFAQLKV
RDEEMNELDDLHQQCEVVAMGGAEHIHGKVNILLQSHISRIRVDSFSLVSDINYITDNSV
RITRALFEIVLHRNWPLMAGRLLTMAKMLEHQMWHFESPMKQFARLTHEIIEKIEDKRLT
IEKIRDMDPKEIGKLIRHERMGREIKAAAWQFPLLEIESKIQPITRTVLRVTLNISADFT
WSDRIHGSQEVYWIWVEDPDNNHMYHHEQFTLTKKQVVRREEQQLVFTIPIFEPLPNQYY
VRAISDKWLSCESTCVMNFQNLILPERHPPHTDLLDLEPLPVTALDNMGFEMLYKFSHFN
PIQTQLFHCLYHTDNNVLLGAPTGSGKTIAAEIAMFRIFREAPEAKIVYIAPLKALVRER
VDDWRVRLQERLGKRVVELTGDVSPDIRAIQAAHVIITTPEKWDGISRSWQTRNYVKQVA
LIIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKKLRVIGLSTALANAKDLADWLGIGPM
GLYNFRPSVRPVPLEVHIAGFPGKHYCPRMATMNKPTFQAIKQHSPDKPVLVFVSSRRQT
RLTAIDLMGFVVVEPNPKQWLKMPDHEMDQILSNIRDENLRLCLSFGIGLHHAGLIERDR
KVVEELFVNQKIQILIATSTLAWGVNFPAHLVVVKGTEYYDGKTKRYVDFPITDVLQMMG
RAGRPQFDTQGVAVILVHDQKKHFYKKFLYEPFPVESSLMGVLPDHMNAEIVAGTISTKQ
EALDYLTWTYFFRRLVQNPSYYGLELDDEDRANNAINTFLSQTIDRALTCLENAYCIEIG
EDNRTIRTTPLGRIASFYYLSHETIQLFHDKLSAGITMEELLDLMTQAHEYNELPVRHNE
DNLNAVLAKTCPIKVNEYTYDSPHTKTHLLLQAHMSRLKLPCVDYLTDTKSVLDQAIRIL
QAMLDICGCAGWLAAALQVQVLMQMVTQARWHMDSSLLTLPSVTSDTLYCFKHDGRSIQS
LPELVQIVSGRYETLATMLREELDEGQIENVFKVLKHLPLLNVSVAVRGWWANTENQSEA
RVNIRSTEENRKNSDWVEVHADQEYSLAIHLHRVNRGQDLRIHAPKFPKPKDEGWFLVLG
EVESGELLALKRVPPVRGRATHTLSFKTPDQPGRAVLTLYVMSDSYLGLDQQYDLPLEII
PASLEAQVNSELVISEADEEVLTKWLPPPADTPVFK
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcatggtggaagacctgttgggcctccaagattaacttcatttcttcgtgca
tatgccaatgtcagcaggaaaggaaatgaggatgattatgacctggctcaaatcttggca
atcaaaagagaacagcgaaggcagcgaatgaaagagagtggagtcacatggcctcgcatc
aagaaccaggtggagcatcttgggagagagaatggggttaatttagattgttatttgcga
gaggcggcagaagtggcacgccaggttgccccggagctggacacacgtgacgaggcagcc
accctgctcttcactgtctcccatgatcatgcagtcctgcctgtcaagcataaactcaaa
ctccaccagatgtttggcgatgtgaagccgtatttactggagagggctcataaggctgtt
cgcaatgttgctgatctcgtaggcgaagaagagctcaaggagatgatgcagaatttgcag
aatgatcaagagacaacgacaatgtttggagctaatattaaagttggaaaacttggacca
cctcccgaattgccaccaatggataaactgatcaacttgcaaaaagttaaagtagaatct
aaagcaaccttacgatatgatgattacaaaccagagacagttcagactcaggtgaagaag
aaggtgattaaggatacatatgataagtcatgggtagaagcagagatgttgaaatattat
actgacacaagcatagtctcagagctaagcagtggaaccatggccctcctgattagcagc
aagggtgatgatgaactgcagaatgagatgtttgagttactaggatttgagagatttgaa
cttatccagactctgctgcaacatcgaaacgaaattaaaaacccaccaccagacaaggac
gtaaagattgcagaattgctcagtgacctagaaaagagaggaatacctgaacgacctata
ttcggtcagcaagtcaccgttatgaatgaaacagagaagcagtacctcaagcaggcaagg
aaggaggagaagaagttgctaaaaactgccaaacagatagcagaggatgactccatagat
gacttcagtccagagacactaaaagcgaaaagagaagctgctcttttggaagcttcccag
gcatatctcttcaagaaacgcgaccgagtgaatgtcccagagatacggtttccctatgtg
tttgattctcagaacaaagccaagcagacagcaggttacatagcaggtatgaaaatagct
ttgcctgaaggcttcactaggacttacgatgatgtattggaagaggtggatattccaatg
tcagatccagctcctcctgaagttggagctaatctcataaatgtaaaggagcttgatgag
attggaagaatagcatttaaaggttgcaagacactgaacagaatccagacagtagtttat
ccatctgcataccacagcaatgacaatttgctcatatgtgctccaaccggtgctggtaaa
acaaatatagctatgttgactgtcgtacaccaaattagacagcatattgagaatgatgtt
attcagagagataaatttaagattgtttacattgctccaatgaaagccctggcagctgag
atggcacgcaactttggaaagcgccttgagccacttgggataactgtgaaagagttgact
ggagacatgcacctgactaagccagagataatggccaccaacatgattattacaacgcca
gagaaatgggatgtgacgacgcgaaagccaggagacactcagttatcacagctcgtaaaa
ttgctgattattgatgaagttcacctgcttcatggagatcgaggacctgtactggagact
ctggttgcaagaacattacgtatggtggaatctcagcagtcaatgataaggatagtgggt
ctgtctgccacacttccaaattatattgatgtggcaacctttctcagagttaatccatac
aaaggactattcttctttgatggacgtttccggccagtgcctcttggactgaccttcatc
ggtatcaaagctcttggaaggttcaagcagatggaagatatggacagggttacttatgag
aaatgccttcactttataaagcaaggccaccaagtgatggtctttgtccatgcaaggaat
ggaactttgcgaactgctgaaaatcttatcaagatagcacaagagatgggtaaaacagaa
gacttcctgcctgatgatggacctgagcttgccaatgcccgaaaagacatggcacgatca
cggaacaaaaagctgttggagttatttgattcaggttttggtgttcatcatgctgggctg
ctgcgagctgatagggcagcaattgagaatgtttttagccaggggatgatcaaagtgttg
gtatgcacagctacccttgcctggggtgttaaccttcctgctcatgccgtcatcattaag
ggaacagatatttatgatagcaaacacggcaccatggttgacttaggaattctagatgtg
ctgcagatttttggtcgtgctggtaggccgcagttcgataagaatggtcatggaacaatc
atcaccacgcatgataaattagcccattatctttctttgttaactaatcagtatcctata
gagagttccttcatcaagcatctggcagataatttgaatgctgaggtgtcactaggcaac
gtcaccaacatggaagaagctattgaatggatgagttacacgtaccttcacgtccgcatg
aggaagaacccccaggtttatggattgctgtataaggatgcgcagcaggaccctaatctt
gaaatgtttcgacgtgagcttctcaccacggctgcgagggcactggataaggctcgtatg
gttcgatttgatgatgccactggctttatgcatattacagatctagggagaattgccagt
cagttctacattaagtatgacacagttgaaattttcaatgagtttttgaaatctgttatg
aatgaaggagacattttagctgtgatatcacaaagctctgagtttgcacaattaaaggta
cgagatgaggagatgaacgaactggatgacctccaccaacagtgcgaggtggttgcaatg
ggaggagctgaacacatacatggcaaagtcaacatccttttgcaatcacatatctcacgc
atcagagtagatagtttctcactggtgtcagatatcaattatattactgataactctgtg
agaataacacgggcactctttgagatagttctgcacaggaattggcctctgatggcaggt
cgtctacttactatggcgaagatgttggaacaccagatgtggcactttgagagccccatg
aagcagtttgcccgcttgacccatgagattattgagaagattgaggacaagaggctcacc
attgagaagatcagagatatggatcctaaagaaatcgggaagctgatccggcatgaaagg
atgggaagggaaattaaagctgctgcttggcagtttccgcttcttgagatcgagtccaaa
atccagcccatcacaaggactgttcttagggttacgctaaacatcagtgcagatttcact
tggagtgacagaattcacgggagtcaggaagtgtattggatatgggtggaagatcccgac
aacaaccacatgtaccaccatgagcagttcacactcaccaaaaaacaagttgtgcgaaga
gaggagcagcaattggtattcactataccaatctttgagccactgcctaaccagtactat
gtaagagccatcagtgacaagtggctcagctgcgagtctacgtgtgtgatgaatttccag
aatctaattctacccgagagacatcctcctcacactgatttacttgatttagaaccactg
ccagtgactgcccttgacaacatgggatttgaaatgttgtacaagttcagccattttaac
cccatacagacccagctcttccactgcttatatcacacagataataatgtattacttgga
gctcccactggttctggcaaaacaattgctgctgagatagccatgttcagaatatttagg
gaagctccagaggcaaagattgtctacattgccccactgaaagcccttgtgcgagaacgt
gtagatgactggcgagtaaggctccaggagaggctggggaagagggttgttgagctgact
ggtgatgtgtcgccggatattagggccattcaggctgcccatgtgattataactacacct
gaaaaatgggacggtatctctcgctcatggcagacaaggaactatgtcaaacaagtagcc
ctgattatcatcgatgagattcatttactcggggaggatcgtggtcctgtgcttgaagtg
attgtgtcacgtacaaacttcatctccagccatactagtaagaagttgcgcgtcattggc
ctctctaccgctctggcaaacgctaaggacttggcagattggcttggaattggcccgatg
ggcctgtataatttccgcccatctgtgagacctgtgccactggaagttcacattgcaggt
ttccctggcaaacattattgtccacgtatggcaaccatgaataagccaacattccaagcc
atcaagcagcactcgcctgataagccagtgttggtgttcgtctcgtcacgtaggcagact
agactcacagccattgacctcatgggttttgtggtagttgaacccaatcctaaacagtgg
ctgaagatgccagatcatgagatggatcagatattgtcaaacatccgtgatgagaacctt
cgtctttgcttgtcatttggaattggtcttcaccatgcgggcctgatagagagagacaga
aaagttgttgaggagttgttcgtcaaccagaaaatccagatcctcattgcaacatccacc
cttgcctggggagtgaacttcccagcccatcttgttgtggtcaaggggactgaatactat
gatgggaagaccaagagatatgtagacttcccaattacagatgtgttgcaaatgatgggg
cgagcaggaagacctcagtttgatactcagggtgttgctgtcattcttgttcatgaccag
aagaagcatttttataagaagttcctctatgaaccatttcctgtggagtccagcttgatg
ggtgtcctgcctgatcacatgaatgctgagattgttgctggcaccatttccacaaagcaa
gaagccttagattacttaacttggacttatttctttaggaggctagtccagaatccatcc
tactatggactagaactggatgatgaggacagagcaaataatgccattaacacctttctc
tctcaaactatagacagggcattgacttgtctagaaaatgcatactgcattgaaattgga
gaggacaaccgcactatcaggacgacaccacttggccgcatagcttccttctactacttg
tcccatgagacaatccagctcttccacgataagctcagtgctggcatcactatggaagag
cttttggatctgatgacgcaggcacatgaatataatgagttgccagttcgtcacaatgag
gacaacttaaatgctgtgttagcaaaaacctgtcccatcaaagtgaatgaatacacatat
gattctccccacacgaagacccacttgctcctccaggctcacatgtctagactaaagtta
ccttgtgtagattacctcactgacacaaagtctgttctggaccaggctataaggatttta
caggctatgttggatatctgtggatgtgcaggctggttggctgctgcactacaagtccaa
gtgttgatgcagatggttactcaagcacgctggcacatggacagctcccttctgacgctg
cccagtgttacttctgacactttgtattgtttcaaacatgatggaagaagtattcagagt
ctgccagagcttgtgcaaattgttagcggacggtatgaaacactggcgacaatgctccga
gaagaattagacgagggacagattgaaaatgtctttaaggtcctaaaacatctaccatta
ctcaatgtcagtgtggctgtacggggttggtgggccaacacagagaatcagtcagaggcc
agagtcaacatcaggagcacagaggagaaccgcaagaacagcgactgggttgaggtccat
gcagatcaggaatattccctggccatccatcttcaccgtgtgaacaggggtcaagacctt
cgcatccatgctccaaaattcccaaagccaaaagatgagggctggttcttggtcctaggg
gaggtagagtctggggagttgctggcactcaagagagtgccacctgtccgtggcagagcc
actcacaccctctccttcaagacacctgatcaaccaggacgagcagtactgacactgtat
gtgatgtcagacagctatcttggcttggatcagcagtatgacctcccccttgaaatcatt
cccgccagtcttgaagctcaagtgaactcagaactagtgataagtgaagcagatgaagaa
gtgctcaccaaatggcttccaccccctgcagacactcctgtttttaaatag
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integrated database retrieval system
