Penaeus vannamei (Pacific white shrimp): 113828951
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Entry
113828951 CDS
T06111
Symbol
Cyfip
Name
(RefSeq) cytoplasmic FMR1-interacting protein isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113828951 (Cyfip)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113828951 (Cyfip)
Factors involved in mRNA localization
Other mRNA localization factors
113828951 (Cyfip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
SLED
Motif
Other DBs
NCBI-GeneID:
113828951
NCBI-ProteinID:
XP_027237818
LinkDB
All DBs
Position
28:complement(33046273..33099231)
Genome browser
AA seq
1587 aa
AA seq
DB search
MADLPPPPPPPPEDYDLDILPPPPPPPVDYDMSVLPPPPPPPTDDFQAPLPPPDDFQAPL
PPPDDFQAPVPPPDYDLDSEPPPPPPQVLSESAGGGDPRASLTDMGQRARSRESDTASLS
SRRSTWSSTSQHKGPRRPPSRQSLASTPPAGERRGPGGVVLQRQVSSASMAAYTQPFMLS
EEAQGASSLYGTMSKAARKAAKTQRQPYQNAETYGTIRRGNAGMNRYDLHDHKSGSSSSR
DVRNLQWDELGRLSRNSLHSVSNGSQMTLSGSDLAPIPQEEAGQQDFLTRLKPVPRLVSE
EGVGMAGERVTITDALSNVDVLDDLPLPDQQPVIEAQACSVVYTANFDTNFEDRMAYVTG
VAKYMEEAATHAELNKLLEEGENHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVKVL
SDEVKKLTKFMNFQRKAIDVFCNQIKRLCHQEKRKDFVSEAYLLTLGKFINMFAVLDELK
NMKSSVKNDYSTYRRAAQFLKVMSDTQSLQESQNLSMFLATQNKIRDTLKEKLTAIPSYE
DLLCDVVNISVHMFENRMYLTPKEKQMLVKVMGFGLFLIDSDICNINKLDQKKKIKLDKI
DKIFKNLEVVPLFGDMQIAPFNYIKRSKNFDAKMWPLCSASTTSPQADLMCHLPRIRDEH
IKYISELARYSNEVITTYKETARTDAENKDIADLALRGLQLLSEWTSVVTELYSWKLLHP
TDHHSNNQCPADAEEYERATRYNYTDEEKFALIEVIAMIKGLQVLMARMETVFLDSIRRN
IYQEMQDFVQLTLRDPLRKAIKNKKELLRTILVSVRETSADWVKGMEPPDDPALKGKKDP
DNGFEIKVLRRNVGPSSTQLYMVRTMLESLISDKSGGKKTLRKELDGQHLCQIDEFHKTS
FFWTYLLNFSETLQFCCDLSQLWYREFYLEMTMGRRIQKCTVEHHHNEECKDLVVMDKRI
QFPIEMSMPWILTDHILRTKDASMMECVLYPLDLYNDSAYYALTQFRKQFLYDEIEAEVN
LCFDQFVFKLSEQIFAYYKHLAGSILLDKRFRSECSLHNMRIHYPPANRYDTLLKQRHVQ
LLGRSIDLNKLICQRINSSMHKSLEVAIARFEGADITSVVELEGLIEVNKLTHKLLSQLL
VLDDFDAQLREANHNVLAPYGRTTLHVFWELNYDFLPNYCYNAATNRFVKAPVTTFAQPV
QRDKPPNVAPYMVWGSKALNVAFNTIYSQYSGFLGPPHLRSIVRVLGYQGIAVVMQELLE
IIHSLIQGNIHQFTKTLLQAMPKQCKLPRYDYGSPGVLGYYHAQLNDIVQYPDARTDLFH
HFRELGNALLFCLLVEQSLTQEEVCDLLQAAPFQNILPRPYCKEGEKPETKQKRLEAKYA
PLQIVSNIERLGTAKQAMIAREGDLLTRERLCCGLSIFEVILTRIQTFLEDPIWHGSPPA
NGVMNVDECTEFHRLWSALQFVMCIPVGANNFTVEQLFGEGLNWAGCCMIVLLGQQRRFE
ALDFCYHVLRVQKVDGKDEAVKGIQLKRMCDRIRRFQVLNSQIFAVLNKYLKTSDPDNLP
VEHVRCFQPPIHQSLANQTYQRPDHLR
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctcccgcccccgccgccgcctccgccagaagactacgacctcgacatcctg
cctcctcctcctccgcctcccgtcgactatgacatgtccgtcctcccgccgcctccgcca
cctcctacggacgacttccaggcgcctcttcctcctccggacgacttccaggcgcctctt
ccccctccggacgacttccaggcgcccgttcctcctccggactacgacctggacagtgag
cctcctccgccgcccccgcaggtcctcagcgagagcgcgggcggcggcgaccccagggct
tcgctcacggacatgggacagcgggccaggtcacgcgagtccgacacggcgagcctctcc
agccgcaggtccacgtggtcctcgacgagccaacacaagggcccgcgacgccctccctcg
cggcaaagcctggccagcactcctcccgccggcgagcgcagagggcctggcggcgtcgtc
ctgcagcgccaggtgtcctcggcttcgatggcagcctacacgcagccgttcatgctgtcg
gaggaagcccagggcgcgtcctccctctacggcaccatgagcaaggcggcgaggaaggca
gccaagacgcagcggcagccctatcagaatgctgagacgtacggtacaatccggcgcggg
aacgctggtatgaaccggtacgacttgcatgatcacaaaagtggctccagttcaagcagg
gacgtgaggaatctccagtgggacgaactaggaagattatccaggaacagcctccactcg
gtctccaacggctctcagatgaccttgtccggaagtgacctcgcgccgatcccccaggag
gaggcgggtcagcaggacttcctcacaagactcaagccggtgcccagacttgtgagcgag
gaaggcgtcgggatggctggtgagcgtgtgaccatcactgatgccctcagcaatgttgac
gtccttgatgacttgccgctgccagaccagcagccagtcatcgaggcacaggcatgctcg
gtggtctacacggccaacttcgacaccaactttgaagaccgcatggcctatgtgacaggg
gtggcgaagtacatggaggaagcagctacccatgcagaattgaataaattattagaagag
ggtgaaaatcatgcggttatgctatacacttggcggtgctgttctcgtgccatcccccaa
ccaaagtcaaatgagcagccaaatcgtgtggaaatttacgagaaaacggtgaaggttctg
tcagatgaagtaaagaagttgacaaagttcatgaatttccagaggaaagccattgatgta
ttctgcaaccaaatcaagcgactctgtcaccaagagaagcgaaaggactttgtgtctgaa
gcctatctcctcacgcttggcaaattcatcaacatgtttgctgtcctcgacgaattgaag
aacatgaagtcgagtgtgaagaatgactactcaacgtacagaagagccgcgcagttcctc
aaggtgatgagtgatacccagtctctacaggagtcacagaatctatctatgttcctggcc
acacagaacaagatcagggataccctcaaagagaagctaacagcaattccttcatatgag
gacctcctttgcgatgttgtcaacatctcagtgcacatgtttgagaaccgcatgtacttg
acacccaaagaaaagcagatgctggtcaaggtgatgggatttggtctcttcctcatcgac
tcagacatttgtaacatcaataaactcgaccagaagaagaagattaagttggacaagatt
gataagatctttaagaacctagaggttgttccactgtttggtgacatgcagattgcacct
ttcaattatataaagaggagcaagaactttgatgccaaaatgtggcctctatgcagtgca
tcaaccactagcccacaggcagacctgatgtgtcatttaccacgcattagggatgaacac
atcaaatatatctcagagttagcaagatacagcaatgaggtcatcacaacatataaggaa
acagcacgcacagatgcagagaataaagacatagcagacctcgccctccgcggcctgcag
ctcctcagtgaatggacaagcgttgtcacagagctttattcttggaaactactgcatcct
actgaccaccactccaataaccagtgcccagctgatgcagaagaatatgaaagggccaca
cggtacaattacactgatgaagaaaagtttgcccttatcgaagtcattgcgatgattaaa
ggcctgcaagtcttaatggcccgcatggagactgtattccttgactcaatacggcgcaac
atctaccaagagatgcaagatttcgtgcagctcaccctaagggaccccctgcgtaaggcc
atcaagaacaagaaggaactcttgaggacgatcttggtgtcggtgcgtgagacaagtgct
gactgggtgaagggaatggaacccccagatgaccctgccctcaagggcaagaaggaccct
gacaacggctttgagatcaaggtgctaagaaggaatgttggcccttcctcaacacagtta
tacatggtgcgcaccatgctggaatctctgatttcggataaatcaggaggcaagaaaacc
ctgcgcaaggaactggacggccagcacctctgccagattgatgaattccacaagacctcc
tttttctggacatatttgttgaactttagcgaaacactccagttttgctgtgacctttct
cagttatggtacagggagttctacttggagatgacaatgggtcgcaggatacagaagtgc
actgtggagcaccatcacaatgaggaatgcaaagatctggtggtgatggacaagcgcatt
cagttccccattgagatgtccatgccctggatcctaacagaccacatcctgcgcaccaaa
gatgcgtcaatgatggaatgtgtcctctaccctcttgacctgtacaacgacagcgcctac
tatgctctcacacagttccgcaagcagtttctctatgatgaaattgaagcagaggttaac
ctctgctttgaccagtttgtcttcaagttatcggaacagatctttgcctactataaacat
ctagctggcagcattctacttgacaagagattcaggagtgagtgcagccttcacaacatg
agaatccattacccaccagcaaataggtatgacaccttgctgaagcagcgtcatgtgcaa
cttcttggccgcagtattgacctcaataagctcatctgtcagcgtatcaattcatccatg
cacaagtcccttgaagtggccattgctcggtttgaaggggcagatatcacatctgttgtg
gaactggaaggactcattgaggtaaacaaactcacacacaaacttttgagtcaactgctc
gtactggacgacttcgacgcacaactgagggaggcgaaccacaatgtccttgctccctat
ggcagaacaacactccatgttttctgggaactcaactatgacttcttacccaactactgc
tacaacgcagccactaatcggtttgtcaaagcacctgtaactacatttgcgcaaccggta
cagagagacaagcctccaaatgtggcaccgtatatggtctggggtagcaaggctcttaat
gtagctttcaacacaatttactcacagtattcaggcttccttggtcccccgcatctacgg
tccatcgtccgagtgttagggtatcagggtattgcagtggtgatgcaagagctcctcgag
atcatccactcgctcatccagggcaacatccaccaattcacgaagacattgctgcaggct
atgcccaagcagtgcaagcttcccagatatgattatggatccccgggtgtactgggctat
taccatgcccagttgaatgatattgtgcagtatcctgatgcccgaacagacctcttccat
cacttccgagaattgggcaatgcccttctgttctgcctgttggtagagcaatcactcaca
caagaagaagtttgtgacttgctgcaagctgcaccgttccagaatatcttgccgcgcccc
tactgtaaagagggtgagaagccagagacaaaacagaagcgtttagaggcaaaatatgct
cctttgcagattgtctccaacattgaaaggcttggaacagcaaagcaagccatgattgca
cgagaaggtgacttattgacaagagagcgcctttgctgtggcctgtcaatctttgaggtt
attttgacacgaatacagaccttcttggaagaccccatctggcatggttccccacctgca
aatggtgtaatgaacgtagatgaatgcactgagttccaccgactgtggtctgcacttcag
tttgtcatgtgcataccagtaggagctaataacttcactgttgagcaactcttcggtgag
gggctcaactgggctggctgctgtatgattgtccttctgggccagcagcggaggttcgag
gcgcttgacttctgttaccatgtcctacgggtgcaaaaggtggacggaaaggacgaggcc
gttaaaggaattcaattgaagaggatgtgtgatcgcatccgacggttccaggtgctgaat
tctcaaatctttgctgttctgaacaaatatctgaagacaagtgaccctgacaacctccca
gtagaacacgtgcgatgcttccagccacctatccaccagagcctggctaaccagacatac
cagcgaccagaccacctgcgctag
DBGET
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