Penaeus vannamei (Pacific white shrimp): 113829158
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Entry
113829158 CDS
T06111
Symbol
Polr2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03020
RNA polymerase
pvm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113829158 (Polr2J)
09124 Replication and repair
03420 Nucleotide excision repair
113829158 (Polr2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113829158 (Polr2J)
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113829158 (Polr2J)
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113829158 (Polr2J)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113829158 (Polr2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
CorA
SPOC_AIPP2
Motif
Other DBs
NCBI-GeneID:
113829158
NCBI-ProteinID:
XP_027238060
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All DBs
Position
11:complement(44255127..44258938)
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AA seq
118 aa
AA seq
DB search
MNAPPTFESFLLFEGEKKIIKEVDTKVPNAAIYTINKEDHTLGNMIRMQLLKDPNVIFTG
YKNPHPLEHKVLLRIQTSDASYTPHDAFMNAITDLISELSLLEERFREAIREKKEGFD
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccgccgacattcgaatcctttcttctcttcgagggagaaaagaaaatcatc
aaagaagtggatacgaaggttcccaatgctgccatttacaccatcaacaaggaggatcac
accctaggcaacatgatccgtatgcagctgctgaaggaccctaatgtaatcttcactggc
tataagaaccctcatcctctcgagcataaagtgttgctcagaatacagacttcagatgcc
agttacaccccacatgacgccttcatgaacgccatcacagacttgatatccgaactttcc
cttcttgaggaaagattcagagaagccatccgagagaagaaagaaggctttgactaa
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