Penaeus vannamei (Pacific white shrimp): 113829181
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Entry
113829181 CDS
T06111
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113829181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113829181
Enzymes [BR:
pvm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
113829181
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113829181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
QIL1
Gp5_trimer_C
Motif
Other DBs
NCBI-GeneID:
113829181
NCBI-ProteinID:
XP_069984635
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All DBs
Position
2:3081499..3094402
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AA seq
475 aa
AA seq
DB search
MPEGPEIYLASRFINLVSKSRIYGGQVVKSEVSTKNPDVPWAAKHYRVTATARGKELKVT
VHEGRDEEKKNRSTLDILIRFGMSGSFKFTQVDETPKHAHLRFYTVEEDPPMVLSFVDYR
RFGRWEVNGTWGSDRGPDPMWEYPGFRENILTNLKSAAFNKPICEAMLNQKFFNGIGNYL
RAEILYRCGIAPFDEAREVLSEIKPFSKWYESTLSPKTAAGVKCEPDILDLCHILPKEVI
NLEGKGKGYNVDLDADEDDYKAFKEWLQCYYQDGMNNMVDHNGRTMWFSGKPGKMVPKAA
ASRGKKQSKKNKKDVDEEDTANHGSSRKRVKKEAEDEIKKEDMKQLKQELKEDMKKQVKK
EIKKEVKEKVKKEVKEEQKQGRARKNSKKSANIKENNAVKTSITISNKLAQKIKENKPKR
ANNREKKPVKNARTPNVKNARTPKVKVTKKIKVVDSVHRESPVRRSKRLGSVIEN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggacctgaaatctacttggcatctcgttttatcaacttggttagcaaaagc
aggatatatggcggacaagtggtaaaatctgaagtgtcgacgaagaatcctgacgtgcca
tgggctgctaaacactacagagtcaccgcaacagctcgggggaaggaactgaaagtgact
gtgcacgagggtcgagatgaagaaaagaaaaatcgcagcactctcgacatcctcatacgg
ttcgggatgtctggaagtttcaaattcacgcaggtcgatgaaactcccaaacatgcccac
ttaagattctacacagttgaagaagatccccctatggtgctaagtttcgtagactacaga
cgctttggccgatgggaagtgaatggtacatggggttcggacagaggaccagaccccatg
tgggaataccccggtttccgggaaaacattttaacgaacctcaagtctgcggctttcaat
aaaccaatttgtgaagctatgttaaatcagaagttttttaatggtattggaaactacttg
agagcagaaattctttacaggtgtggcattgctccttttgatgaagctcgtgaggttctg
agtgaaatcaagccctttagcaagtggtacgagtctacactttcccctaaaacagcagct
ggtgtgaaatgtgagccagacatcttagacttgtgtcacatattgccaaaagaggtaata
aatcttgaaggcaaaggtaaaggatataatgtggacttggatgcagatgaagatgattac
aaggcctttaaggaatggcttcagtgttattatcaagatggaatgaacaatatggtagac
cacaatggccgtactatgtggtttagtggaaagcctggaaaaatggtgccaaaagctgca
gcctcaagaggtaaaaagcagagtaagaaaaataaaaaagatgttgatgaagaagataca
gcaaaccatggaagcagcaggaaacgtgttaagaaggaggctgaagatgagataaagaag
gaagatatgaaacagctaaagcaggaattaaaggaagatatgaagaagcaagtaaagaag
gagataaagaaggaagtaaaggagaaggtaaagaaggaagtaaaggaagaacagaagcaa
ggacgtgccagaaaaaacagcaaaaaaagcgcaaacataaaggaaaataatgctgttaag
acctccataactataagcaacaagttagctcaaaaaattaaagagaataaacccaagagg
gcaaataacagagaaaagaagcctgtgaaaaatgccagaacacccaacgtcaagaacgcc
agaacacccaaagtcaaggttacaaagaaaattaaagttgtagactcagtgcaccgagag
tcgccggtaaggagatcaaaaagactcggttctgtcattgagaactga
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