Penaeus vannamei (Pacific white shrimp): 113829366
Help
Entry
113829366 CDS
T06111
Symbol
LSm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03018
RNA degradation
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113829366 (LSm7)
09123 Folding, sorting and degradation
03018 RNA degradation
113829366 (LSm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113829366 (LSm7)
03041 Spliceosome [BR:
pvm03041
]
113829366 (LSm7)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113829366 (LSm7)
mRNA degradation factors
5'-3' decay
Lsm complex
113829366 (LSm7)
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113829366 (LSm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113829366
NCBI-ProteinID:
XP_027238336
LinkDB
All DBs
Position
3:28663870..28668172
Genome browser
AA seq
140 aa
AA seq
DB search
MASHGGGAGGGGVSRETVAAAGATGPGERREGGPGARNGEPKDKKRKESILDLSKYLDKA
IRVKFSGGREASGILKGFDQLLNLVLDNTIEYLRDPDDPYKLTEDTKERGLVVCRGTAVV
LICPMDGCEAIANPFVQQEN
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacatggtggcggtgcaggtggaggtggtgttagcagagaaacagttgctgct
gcaggtgccaccgggcctggtgaacgtcgagagggtggaccaggagcacggaatggagaa
ccaaaggataagaaacgaaaagagtccatccttgaccttagcaaatatcttgacaaggca
attagggtgaagttttccggtggacgtgaagcttcaggaattttgaagggattcgaccag
cttctaaatcttgtgcttgataataccatagagtaccttagagatccagatgacccttac
aaactaacagaagacacaaaggagagagggttggtggtctgtcgaggaacagctgttgta
cttatctgtcctatggatggctgtgaggcaattgcaaatccttttgtgcagcaagaaaat
taa
DBGET
integrated database retrieval system
