Penaeus vannamei (Pacific white shrimp): 113830322
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Entry
113830322 CDS
T06111
Name
(RefSeq) integrin beta-PS isoform X1
KO
K05719
integrin beta 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
pvm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
113830322
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113830322
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113830322
09142 Cell motility
04820 Cytoskeleton in muscle cells
113830322
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113830322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113830322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113830322
04515 Cell adhesion molecules [BR:
pvm04515
]
113830322
04090 CD molecules [BR:
pvm04090
]
113830322
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113830322
Exosome [BR:
pvm04147
]
Exosomal proteins
Proteins found in most exosomes
113830322
Cell adhesion molecules [BR:
pvm04515
]
Integrins
Integrin beta subunits
113830322
CD molecules [BR:
pvm04090
]
Proteins
113830322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
Integrin_B_tail
I-EGF_1
EGF_2
EGF_Teneurin
DUF3984
Motif
Other DBs
NCBI-GeneID:
113830322
NCBI-ProteinID:
XP_027239322
LinkDB
All DBs
Position
39:388827..409913
Genome browser
AA seq
827 aa
AA seq
DB search
MRWLGLSILLVVATLAWATQECKNKPTCSQCIQTPNCMWCGKPGNFTNENGKGLSRCIKR
TDELATEWRAQCGSLYIDEPGNYFENIVNNNLTAAGVLAGGSASGSGMSISGSSSEEAVV
QIKPQRVQMRLRVQEAYNMQVTFRQAEDYPVDLYYLMDLSKSMEDDKESLSKLGVQLADE
MQKITRNFKLGFGSFVDKVVMPYVSTVPERLLHPCTNCTAPYGFRNALPLTTNATAFAYE
VQEAPVSGNLDAPEGGFDAIMQAIVCQDQIRWRSEARRLLVFSTDAGFHYAGDGKLGGIV
KPNDGECHLNNKGEYTHSTLQDYPSVSQINQVAKQHKMNLIFAVTQEQSSVYSRLSQMIE
GSGQGELTANSSNVVELVKAEYNKITSKVELKDNATAPVNIRYFSKCKDGTEKETSVCQG
LKVGDQVEFRIEVTVEKCPEKREDWRQLIGIYPVGLRENLTIDLTMLCDCQCERPGDPGY
IIGAEQCNYHGTYQCGVCKCDDGFFGSNCECGSNTPWATGDYDDSSCRETNSSAICSGRG
TCTCGECKCNERDHSEEIVSGKFCECTNFLCDRHNGLLCSGPDHGECVCNECKCKPGWTG
EACNCEDSESNCVNPDTGDICSNQGKCECNQCKCYETADGRYSGKWCEDCPLCGTDFKCL
DFKECVQCRVYETGPLAEDPVLCDSCSLLYSTITDRAIANYTINVTNWVEVENEGERLCT
FFDENDCRFTFVYGYDENKEPIVRVQQTLECPPKLDILGIVLGVIGAIVAVGLALLIMWK
VLTTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPMYGGGK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggttaggcctgagcatcttgttggtcgtagccactctcgcgtgggctacacag
gagtgcaagaacaaaccaacttgttcacaatgtattcagacacccaactgcatgtggtgt
gggaaaccagggaatttcacaaatgagaatggcaaaggactatcaagatgcatcaagcga
actgatgaactagctactgagtggcgtgcacagtgcggcagtctgtacatcgatgaacct
ggcaactactttgaaaacattgttaacaacaacctgacggctgcaggtgtattggcaggt
ggaagtgccagtggcagtggtatgagcattagtggtagcagttccgaagaagctgtcgtg
cagatcaaacctcaaagagtacagatgaggctgagagtccaggaagcatacaatatgcag
gtcactttcagacaagcagaggattaccctgttgacctttattatctcatggacttgtct
aagtctatggaggatgacaaagaatcactctccaagctgggggtccaattagcggacgag
atgcaaaaaatcacaaggaatttcaaacttggcttcggttcctttgtggacaaagttgta
atgccttatgttagcactgttcctgaaagactccttcatccatgcaccaactgtactgct
ccatatggcttcaggaatgcccttccactcaccacaaatgccactgcctttgcttatgaa
gtacaggaggcaccagtatcaggtaacctcgatgctccagagggtggatttgatgccatt
atgcaggccattgtttgtcaggaccagattaggtggcggtcagaagcccgtcgtcttttg
gtcttctcaacagatgctggatttcattatgcaggagatggcaagcttggaggcattgtg
aaacccaatgatggagagtgccacctcaataacaagggcgagtacactcactcaaccctt
caggattatccctcagtctcacagattaatcaagtcgccaaacagcacaagatgaacttg
atctttgctgtgacgcaagagcagtcgtcagtttattcccgtctttcccaaatgatcgaa
ggttctggacagggagaactcactgctaattcctccaatgtggttgagctggtcaaggct
gaatataataaaattacaagcaaagttgagctcaaggacaatgccacggccccagtgaac
attcgctacttctcaaagtgcaaggacggcacggagaaggaaacctcagtctgccaggga
ctgaaagtgggcgaccaggtggaattcagaattgaagttactgttgagaagtgtcctgag
aaacgtgaggattggaggcagctcattggcatttatccagtcggtttgagagagaacctc
accatcgatcttacaatgctctgtgattgtcagtgcgagcgccctggtgaccctggctat
ataattggagctgagcagtgcaactaccacggcacataccagtgtggtgtgtgcaagtgt
gacgatggcttctttggcagcaactgtgagtgtggctcaaacaccccctgggcaacaggt
gactatgatgactccagctgccgagagactaattcatcagctatatgcagtggccgaggc
acctgcacatgtggagagtgcaagtgtaatgagagagatcattctgaagagattgtaagt
ggaaagttctgcgagtgcaccaacttcctttgcgatcgtcacaatggactactgtgctca
ggacctgatcatggtgaatgtgtctgcaatgaatgcaaatgcaagccaggttggactgga
gaggcctgcaattgtgaagacagtgaaagcaattgtgtaaaccctgatactggagacatt
tgttcaaaccaaggaaaatgtgagtgcaaccagtgcaagtgttatgagacagctgatggc
agatattcaggcaaatggtgtgaagactgtccgctgtgtggcactgacttcaagtgcctg
gactttaaggagtgtgtacagtgtcgtgtttacgagacgggccctttggcggaagatcca
gtgctctgtgatagctgctccctcctctacagcaccattacagaccgagccattgccaac
tatactattaatgttactaactgggttgaagttgaaaacgaaggagagcgtctgtgcacc
ttctttgacgagaacgattgccgcttcacctttgtttatggatatgatgagaataaggaa
ccaatcgtacgtgtgcagcagacactggaatgccctccaaagttagacatccttggaatt
gtattgggtgtcattggagctattgttgctgtcggattggcgttgctaataatgtggaag
gttctgacaactatccatgacagaagggagtttgcgcgcttcgagaaggaacgcatgatg
gccaagtgggatactggcgagaatcccatctacaagcaggccacatccacgttcaagaac
cccatgtacggtggtggcaagtaa
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