Penaeus vannamei (Pacific white shrimp): 113830391
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Entry
113830391 CDS
T06111
Symbol
tgo
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator homolog
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113830391 (tgo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113830391 (tgo)
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113830391 (tgo)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
bHLH_NCOA
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
113830391
NCBI-ProteinID:
XP_069973722
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All DBs
Position
41:complement(20751840..20985137)
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AA seq
689 aa
AA seq
DB search
MATATTQVVQDVDTNSGHNSSIDARKRRAGSLGSDEEESSGSKYGRMESADDSMQDKERF
ASRRPNNHLENHCEIERRENHCEIERRRRNKMTAYIAELSDMVPTCSALARKPDKLTILR
MAVAHMKALRGTGNTNADGTYKPSFLTDQELKHLILEAADGFLFVVACDTGRIIYASDSV
TPVLNQPQSDWFGSSVYEHVHPEDVEKVREQLSTQEPANQGRILDLKTGTVKKEGHQSSM
RLCMGSRRGFICRMKVGAVTPENMNSGHLNRLRQRNSLGPATDGHNYAVVHCTGYIKNWP
PTGVQMDRAEEEAHGSSHCCLVAIGRLQVTSAPNTSDLMGSNSQNEFISRHAMDGKFTFV
DQRVMTVLGYSPQELLAKPCFDFFHPEDQTHMKESFDQVLKLKGQVMSVMYRFRGKNREW
VWLRTAAFAFLNPYTDDIEYIVCTNNAAKTVQGGGEMSANTEHQEVSSVSSQYGTHQPGL
EYSLQRQRELYPHMVQSHIHSTDLPDDGTFQITAGSGRPSSTQGVYSGYEAGASPLAGYS
PSTPQATPLTSQSSSSLPRNTKSSSPPSTAQATAWSNPHIRQSGDGYTYSSNMSPSRSPS
TPSYTPRSLPSYTPAAGSSGMWQYPSIGAEGTSAGPSTSSGHPGTASGHHPGSGAPGTQP
ELTDMLQILDQSGPTSFDDLGNMFNTNFE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcgacaacgcaagtcgtgcaagatgtggacaccaactctggacataatagc
agcattgatgccagaaaacggcgtgctggttccttaggatcggacgaggaggagagctca
gggtccaaatatggccggatggaatcggcggacgacagcatgcaggacaaggagagattt
gccagtcgaaggccgaataaccacctggagaatcactgcgagatcgagcgcagggagaac
cactgcgagatcgagcggcggcggcggaacaagatgacggcgtacatcgcggagctgagc
gacatggtgcccacctgctctgccctggcgcgcaaacccgacaagctcaccatcttgcgc
atggccgtggcgcacatgaaggcactcaggggaacaggaaataccaatgcagatggaact
tacaaaccatcattcctcactgaccaagagctgaagcatttaatccttgaagcggcagat
ggcttcctcttcgttgtagcctgcgacacaggacgtattatctatgcttcagactctgtc
actccagtcctaaaccagccacagagtgactggttcggatcaagcgtctatgaacacgtg
cacccagaagatgtggagaaagtaagagaacagttgagcacccaagagccagccaaccaa
ggacgtattctcgatctcaagaccggaactgttaagaaggaaggccatcagtcatcaatg
agactgtgcatgggttcgagacgtggattcatttgccgcatgaaagttggtgcagttacc
ccagagaacatgaattctggtcacctaaatcggctgcgtcagagaaattccttaggcccc
gcaactgatggacataactatgctgtagtccactgcacaggttacatcaagaactggcct
cctactggcgtgcagatggaccgagctgaagaggaagctcatggatcctcccactgctgc
cttgtggctattggccgtcttcaggttacctcggcaccaaacacctcagatctcatggga
tcaaactcacaaaatgagttcatttctcgtcatgcgatggatggcaagttcacttttgtt
gaccagcgggttatgacagtcttgggatactctccgcaagagctgttggccaagccatgc
ttcgacttcttccacccagaagatcagacacatatgaaggaaagctttgatcaggtatta
aaactgaaaggccaagtgatgtcagttatgtaccgcttccgtggaaagaaccgagagtgg
gtttggctgaggactgctgcctttgcattcctcaacccgtacacagatgacatagagtac
attgtctgtacaaacaatgcagcaaaaactgtccaaggaggcggcgaaatgagtgccaac
acagagcaccaggaagtcagttcggtcagcagccagtatggcacccatcagccaggcttg
gaatactccttacagcggcagagagaactgtacccacacatggtccagtcacacattcac
agcactgatcttcctgatgatggaaccttccaaataacagcaggttccgggagaccaagt
agtacccagggtgtgtacagtggctatgaggctggggcttcacccctagctggctactcc
ccaagcacccctcaggccacaccactcacctcccagtcctcctccagccttccacgtaac
acaaagtcgtcctcgcctccatctacggcacaggcaactgcttggtccaatccacacatc
agacagagtggtgacgggtacacctacagcagcaacatgagcccgtcccgctccccctcc
accccctcatacactccccgttctctgccgtcgtacactccagcagctggctcttcagga
atgtggcagtatcccagcataggtgcggaggggacgagtgcaggtccatccaccagttca
ggccacccaggcactgcctcaggtcaccacccaggcagtggtgctccaggtacccagcca
gagctcactgacatgctgcaaatccttgaccagtctggacccacgagctttgatgaccta
ggaaacatgttcaatacaaactttgaatga
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