Penaeus vannamei (Pacific white shrimp): 113830474
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Entry
113830474 CDS
T06111
Name
(RefSeq) WD repeat-containing protein 18 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113830474
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
113830474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
WD40_alt
Beta-prop_IFT122_1st
Beta-prop_WDR35_2nd
CNTF
Motif
Other DBs
NCBI-GeneID:
113830474
NCBI-ProteinID:
XP_069986038
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Position
14:complement(39646596..39664218)
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AA seq
467 aa
AA seq
DB search
MEPLIEAVVVTSNNTGAESVQVYDVATGTHLKSYRGDIAAQSTLCFVGQAEYLMAAVRDK
PFLQAWALPRHETLQIRLIVPGKACAMAVSPSGPKYCVIGIAEKLTVYKLVTGRMIGVSS
RHYQPVTCLKFTPCGNYFASGGEDGFVYLWSLGSFIETLHKQDAPQVQPHFILGQHSDKV
TDLAMTSSGIQGFLVSSSLDHTAKVFDLVTGRLIYNIISATGITSVACNSLGSQVFLGNS
NGTVNIANLLPHPPPGDVQVSSNNICHTNSVRHIAVTTTGNQLVTGGEDGDVKVWSIAGL
PLASLENASNHNPSLALQKVVHTGRGRINNLAILRTDREALSDADREVEEVIAPFSQDFS
NPLNAEVTIPIRGKGKPQPQHLDIFNFATDPCFDSVEPEKGPDYKNELEESVISLQENNK
DLYNFAMKQILRKTPKGGKGSANRKTNNKGKKASANKNRYFDTKEKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacttatagaggctgttgtagttacatcaaacaatactggtgcagagtcagtg
caggtgtatgatgtggcaacaggtacccacttgaagagttacagaggggatattgcagct
cagtctacactatgctttgtaggtcaagcagaatatctgatggcggctgtcagagacaag
cctttcctccaagcttgggctcttccccgtcacgagaccttgcagataagattaatcgtt
cctggaaaggcttgtgcaatggctgtcagccccagtggacccaaatactgtgtaatcggt
attgctgaaaagttaaccgtatacaagcttgtaactggacgcatgatcggggtgtccagt
aggcattaccagccagtcacgtgtttgaagtttacaccttgtggcaattattttgcatct
gggggagaggacggctttgtctacctgtggagtctaggttctttcatagagactttgcac
aagcaagatgctccacaagtacaaccacacttcatcttgggacaacattcagataaggtc
actgacttggccatgacctcctcaggaatacaaggcttccttgtctcttcttcactagac
cacactgccaaggtgttcgatctcgttactgggcgtctcatctacaacatcatctcagcc
acaggcattaccagtgtagcgtgcaatagtttaggttctcaggtgttcttggggaacagc
aatggcacagtcaatattgcaaacttgttgcctcatccacctcctggtgatgtgcaggtc
agcagtaacaacatatgccatacaaacagtgtgagacatatagcagtaaccactacaggc
aaccagcttgtcacaggtggggaagatggtgacgtaaaggtgtggagtattgctggcttg
cccttggcgagtcttgaaaatgccagtaaccacaacccttcacttgccctccaaaaggtc
gttcacacaggccgtggacgcatcaacaacttggccatcctacgcaccgacagggaggca
ctctcagatgcagacagagaggtagaggaagtcattgctccattcagtcaggacttctct
aatccactcaatgctgaagtcaccattccaattaggggcaaagggaaaccacagccacaa
catctggacatcttcaattttgctacagatccatgttttgacagcgtggagccagagaag
ggtccagactacaagaatgagcttgaagagtcagtcataagccttcaggaaaataacaag
gatctctacaattttgcaatgaagcaaatcctgaggaaaacacccaaaggaggaaaagga
agtgctaaccggaaaaccaataataaaggaaagaaagcgagtgccaataaaaacagatat
tttgatacaaaagagaaaaagtaa
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