Penaeus vannamei (Pacific white shrimp): 113830600
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Entry
113830600 CDS
T06111
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113830600
04121 Ubiquitin system [BR:
pvm04121
]
113830600
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113830600
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113830600
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113830600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
zf-C3HC4
ANCHR-like_BBOX
zf-C3HC4_2
zf-C3HC4_3
DUF5711
zf-RING_2
Prok-RING_4
zf-RING_UBOX
zf-RING_5
COG5_N
Motif
Other DBs
NCBI-GeneID:
113830600
NCBI-ProteinID:
XP_069971329
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All DBs
Position
37:8727943..8777785
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AA seq
881 aa
AA seq
DB search
MFCGLRGGDRACAMANAFPGGLGDAKERLDGLGPSGLGGLSAGGLGGLGNVAVSVAGSLG
SSGSLNLGNNSTGSSGGICPMCMGILEEARVLPCLHAVCSPCLDSLLVGTTLACPTCHTE
LNLDQPLDTLTAPPFLPSLLDIVSTDDDLPTNSPPTSVSKPPAPHINNREQLAPLPRIHK
DLSGGVRSKLYLCASCDDRQAATSRCRDCNEALCDSCVRAHQRVRLTKDHFIVRLSAEDG
NGLIGVGGNGNGRVPGHSHYPEDNCHTPLSLSSPPPTLSSHSSPHPTVMYCSTHEGEVLR
LYCDMCNSAICRECTLRDHRGHSFIYLQDAAENSRSVTLKLLTDARTGIRTIEDSIGVTK
RMVDRVDLRAQAVASDVRSTTRRHISALEDRERKLLHKVEKIRQVKGKTLQDQIDDLSSA
LARLSHTVDTVGSSVDSVNHIELIQMRDKILAEMNELRQVKAHLNPHEDDNIVFTPPDVS
LYQAINAMGFISSSGYAPNSVAVGNGLKQALRGKLATFLVHGKDHLADQRLVGGDQVTVT
VHGPDGLSFKGDVQDRGNGSYLVSYRPQVEGQHMIAVQMRGIHIQGSPFTVQVKSGRSYS
SVGPVLLTLGGEGEGEGQLCRPWGVCCDKDGYIIIADRSNNRVQVFSPDGSFHHSFGTAG
SRPGQFDRPAGVAADHMGRIIVADKDNHRIQVFTFDGTFIFKFGEKGSKNGQFNYPWDVA
VNTEGNIVVSDTRNHRIQLFRADGTFINKYGFEGALWKHFDSPRGVCFNHEGHIVVTDFN
NHRLLVIHPDFQSARFLGSEGSSSGQFLRPQGVAVDQEGHIIVADSRNHRVQIFQPNGNF
LCKFGMPGSGQGQLDRPSGICVSPDGYIIVVDFGNNRVQVF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcgggttgcgcggtggcgacagggcgtgcgcgatggcgaatgcattcccaggt
gggctgggtgatgccaaggaacggttggatgggcttgggccatctgggttgggtggactg
agtgcaggcggcttaggtggcttagggaatgtggcagtgtccgtggctggttcccttgga
agcagtggcagcttaaatcttggcaacaatagcacaggcagcagtggtggtatttgtcca
atgtgcatgggaatccttgaggaagctcgagtactgccatgtctccatgcagtgtgcagc
ccatgcctagactcacttttagtgggcaccacccttgcctgtcctacatgccacactgag
ctcaaccttgaccagccattggacacattaacagcaccaccctttttgccatcgctcctt
gacattgtatccactgatgacgacctccccaccaactctccacccactagtgtcagtaag
ccccctgcaccacacatcaacaatcgtgagcaactggcacctctcccccgtatacataag
gatctctcgggtggtgtgcggagcaagctgtatctctgcgcaagttgtgatgacagacag
gccgcaacttcacgctgtcgagactgcaatgaagccctctgtgactcctgcgtccgtgct
caccagagagttcggcttactaaagaccatttcattgttagattatctgctgaggatggt
aatggcctcataggagttggtggcaatggcaatggaagagtcccaggccactctcactac
cctgaggataactgtcacacaccactaagtctgtcttcaccacctcctacattatcctca
cattcctcacctcatccaactgtcatgtactgcagtactcatgagggcgaggtgctacga
ctctactgtgacatgtgcaattctgccatctgtcgggagtgcacattgcgggaccaccgt
ggccattccttcatttacctacaggatgctgcagagaattcaagatctgtcacactgaag
ctcctaacagatgccaggactgggattcgcaccattgaagacagcattggtgtgacaaag
cggatggttgacagagttgatctacgtgcccaagcagttgcaagtgatgtacgttccacc
acaaggagacacatttctgccctagaggaccgtgagcgaaagctactgcataaagtggag
aaaatccggcaagtgaaaggcaaaacactacaggatcaaattgatgatctaagttctgcc
ttagcaaggctgtcccatacagtagatactgttggctcatcagtggacagcgttaatcac
atagaattgatacagatgcgtgataaaattcttgcagaaatgaatgagttgagacaagta
aaagctcatcttaacccccatgaagatgataatatagtgtttactccacctgacgtctct
ttatatcaggccattaatgcaatgggtttcatctcctcttctgggtatgcaccaaattct
gtggcagtgggaaatggcttgaaacaagcattgcgagggaagttagctacttttttagtg
catgggaaggaccatcttgcagatcaaaggcttgtaggaggtgatcaagttacagtgact
gtgcatggccctgatggtttgtccttcaagggtgatgtacaggatcgtgggaatggttcc
tacttagtaagctacagacctcaggtggaagggcagcatatgatagcagtgcagatgcga
ggtatacacattcagggctcacctttcacagtacaagtaaagtcaggaagaagttactcc
agtgtgggccctgtgttattaactcttggaggagagggtgaaggggaaggtcagctatgt
cgaccatggggtgtctgttgtgacaaggatggctacatcatcattgctgacaggagcaat
aatagagtgcaagtttttagtccagatggcagcttccatcattcatttggtacagctggt
tcccgtcctggacagtttgataggccagctggtgttgcagcagatcacatgggtcgcatc
attgtggctgataaggacaatcatcgtatccaagtgttcacttttgatgggacctttatt
tttaaatttggagaaaaaggaagtaaaaatggacagtttaactacccctgggatgtggca
gttaatacagaaggaaacattgttgtttcggataccagaaatcatcgaatacaactcttc
cgggcagatggcactttcatcaacaaatatggctttgaaggtgcactttggaagcacttt
gactctcctcgtggagtttgtttcaatcatgaaggtcacatagttgtcacagacttcaat
aatcaccgtcttttggtaattcacccagattttcagtcagccagatttcttggtagtgag
ggctcatcatcaggccagtttttaaggcctcagggagtagcagttgatcaggaaggacac
attattgtggcagattctcgtaatcatcgtgtccaaatattccaacctaatggtaatttt
ctatgtaaatttggaatgccagggtctggccaaggccagcttgaccgtccaagtggcata
tgtgtgtctccagatggctacataattgtggttgactttgggaataatcgggtccaagtt
ttctga
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