Penaeus vannamei (Pacific white shrimp): 138859877
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Entry
138859877 CDS
T06111
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138859877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
138859877
03016 Transfer RNA biogenesis [BR:
pvm03016
]
138859877
Enzymes [BR:
pvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
138859877
Messenger RNA biogenesis [BR:
pvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
138859877
Transfer RNA biogenesis [BR:
pvm03016
]
Prokaryotic type
tRNA degradation factors
138859877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
KH_1
KH-I_KHDC4-BBP
S1
PNPase
Motif
Other DBs
NCBI-GeneID:
138859877
NCBI-ProteinID:
XP_069972297
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All DBs
Position
38:<13839656..13853958
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AA seq
450 aa
AA seq
DB search
MLCEIRLRSIFTDFSHNKLSRDEAVNKLRGDVTQKLMQGFPGTDSLIANEVFSRTAKTVF
RNLVLWMKIYKRGQTQVQCTVAFDAPENIPKLDPLLEATGGHKDRNFILHYTFPSFATNE
VSRSGPVSRREIGHGALAEKALRPLLPTNFPFAILLTSTVMESNGSSSMATICGGSLALM
DAGVSLSSPAAGVAVGLVTRYNASEQLQEYKILTDILGIEDYMGDMDFKLAGTRKGITAL
QADVKVPGIPLKVVMEAIQQGTEAKGTVLAIMSETLAQPREQNKEAMPALEKIIVPPNKR
SRVMGPGGINIRKLQSETGVQLTWREDGVLSAFAPNQSSLEEAREVLNELLKDNEPTLEF
GAIYTATVVELRPQGVMVTLYDDMPPVLLHNSQLDTRKIQHPSVLGLEAGQQIKVKYYGR
DPASGHMRISRRALQASNIVARNLHKTEPV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtgaaatacgactgcgaagtatctttactgatttctcccataataagttatcg
agggatgaagctgttaacaaactccgtggtgatgtaacacagaaattaatgcagggattt
ccaggcacagattcattaattgcaaatgaagttttctcaaggacagcaaaaactgttttt
agaaacttagttttgtggatgaagatatataagcgaggtcagacacaagtccagtgcaca
gtagcatttgatgcacctgaaaatatacccaaattagacccattattggaggcaacaggg
ggacacaaagacagaaattttattttacattacaccttcccatcatttgctacaaacgaa
gtctcaagaagtggccctgtatcacggagggaaattggccatggggcattggcagaaaaa
gctcttcggccacttcttccaacaaacttcccatttgcaatccttctcacatccactgtc
atggagtctaatggttcctcatctatggcaactatttgtggtggaagtcttgcccttatg
gatgctggtgtgagtctgtcttctccagcagcaggggttgctgtagggcttgtgacccgt
tataatgccagtgaacagctgcaggaatacaagattttgactgatatcctgggtatagaa
gactacatgggcgatatggacttcaaacttgcaggaactcgaaaaggcattacagctctc
caggcagatgtgaaagttcctggaattcctcttaaagtagttatggaggccatacagcaa
ggcacagaagctaaaggcacagttctagccattatgagtgaaacattagctcagccacgt
gaacagaacaaggaagcaatgcctgctctagagaaaataattgtaccaccaaataagagg
agcagggtcatgggcccagggggaatcaatattcgcaagttgcagtctgagacaggagtt
cagcttacttggcgagaagatggtgttttgtcagcgtttgcacccaaccagtcatcctta
gaagaagcaagagaagtcctgaatgaattattgaaagataatgaacctaccttagaattt
ggtgctatctacactgctacagttgttgagttgaggccccaaggggttatggtaactctt
tatgatgatatgccacctgtattgctccataattctcagttggacactagaaagatccag
catcctagtgttcttggtcttgaagctggccagcaaatcaaggttaagtattatggcaga
gatccagcctcaggtcacatgaggatctctagacgagcactccaagcttccaacatagtt
gcaagaaatctgcataaaactgaacctgtataa
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