Penaeus vannamei (Pacific white shrimp): 138860848
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Entry
138860848 CDS
T06111
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138860848
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvm01007
]
138860848
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
138860848
03029 Mitochondrial biogenesis [BR:
pvm03029
]
138860848
Enzymes [BR:
pvm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
138860848
Amino acid related enzymes [BR:
pvm01007
]
Aminoacyl-tRNA synthetase
Class I (G)
138860848
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
138860848
Prokaryotic type
Other AARSs
138860848
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
138860848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
Haem_oxygenas_2
Motif
Other DBs
NCBI-GeneID:
138860848
NCBI-ProteinID:
XP_069975381
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All DBs
Position
44:273600..330656
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AA seq
423 aa
AA seq
DB search
MAHKYRFLISKRIIDAMDISVKGKGLRSSLVTPHVKIDPGSKREAEFSVSLKSLQEEGLL
HSQPYRKYLLDLGTSIMERIETDPDLPRTYLVQEKTDVKINFQVNFKKLADDIIRITNDN
PFNFWQCNTLVTEVPPHNVVVDFSSPNIAKPFHVGHLRSTILGNFIGNLHAAFGHQVTRI
NYLGDWGTQFGLLKYGYDSRNMKESDLEDNAIDKLFEVYVWANQRAAEDPSIYNIAREIF
SKIEKGDRQELETWKLFRRVTIDDLKKIYFRLNVHFDDFHGESMYNASVCNEVLQEMERK
GLLQLMDDGRKVYQVNSKQRVTIVKSDGSSIYLTRDIAGAVDRYKRYRFTKMYYVVDNSQ
TDHFHALFDILKNLGKDWANSLEHVKFGRILGMSTRKGNAVFLRDLLNEAQDIMKKNQLN
TNR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaaatatagatttctaatctcgaaaaggattattgatgcaatggacatctca
gtgaaagggaaaggattgaggtcatccctggtcactccacatgttaagattgatccagga
agtaagagagaagcagagttcagtgtatcattaaagtcactacaggaagaaggtctttta
cacagtcaaccttacagaaaatatcttctagatctgggcacttccattatggagaggatt
gagacagaccctgatctgcccagaacttacttagtgcaagagaaaactgatgtcaagata
aatttccaagttaatttcaagaaattggcagatgacattattagaattaccaatgacaat
ccattcaacttctggcagtgcaataccctagttactgaagtgccacctcataatgtggtt
gtggattttagctcaccgaacattgctaagccattccatgttggccacttgcgctccact
attcttggaaatttcattggaaacttacatgctgccttcggtcatcaagtgacacgaatt
aattaccttggagattggggcacacagtttggtctcctgaaatatggttatgactcaagg
aatatgaaagaaagtgatttggaggacaatgctattgataagctctttgaagtgtatgta
tgggctaatcagagagctgcagaggatcccagtatatataatattgcccgtgagatattc
agtaaaatagaaaaaggtgacagacaagagcttgagacatggaaattatttagaagggta
acaatagatgatttaaagaaaatatattttcgccttaatgtacactttgacgattttcac
ggtgaaagtatgtacaatgccagtgtttgcaatgaagtgctacaggaaatggaaagaaaa
ggtttgctacaactaatggatgatggaaggaaggtgtatcaagtaaattctaagcaaaga
gtaaccattgttaaaagtgatggatcaagtatatatctaacacgagacattgctggagca
gtggatagatacaaaagatatagattcaccaagatgtattatgtagttgataactcccag
actgatcattttcatgcactgtttgatattctgaaaaacttagggaaggattgggcaaat
tctttggaacatgtcaagttcggtcgcattttagggatgagcacacgcaaaggaaatgct
gtgtttctgcgagatctccttaatgaagctcaagacataatgaagaaaaatcaactaaat
acaaacagatga
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