Penaeus vannamei (Pacific white shrimp): 138861049
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Entry
138861049 CDS
T06111
Name
(RefSeq) transcription factor SOX-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
138861049
Transcription factors [BR:
pvm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138861049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Vir1p
Menin
Motif
Other DBs
NCBI-GeneID:
138861049
NCBI-ProteinID:
XP_069975879
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MLTLDPPDLKGGSLHSAHLPPHSSHSHSVPHTVSHAHHNSHSHTYSLSHHSSLTSLNSSL
SSSLTSPSLASVGSMSAHSPPQTHVPTPTNNNNSSTNNNNNGSSTNSSSNSTSNSKSSAS
SSSAAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPTDPTRPPVQQVTRDMYNMT
NGYMPNGDYGDYGYGYDSAAYGGQGYPYMTGQVYGGYDMTRGYSPTSTSTPSYMNGSYSS
AMYASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGASMPPSASH
TTPGDYPTSVMKREYAPGQPGQQDLSQMISMYLPGSQERHEQQKAAAAAAYMSHAHYHAH
AATSPEQMPPAPMPLTHM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctcgaccctcccgacctcaagggcgggagcttacactccgcacacctccct
ccccactcctcccactcccattccgtgccccacactgtgtcccacgcccaccacaactcc
cactcccacacatactccctgtcccaccattcctcgttgacgtcgctcaattcgtccctc
agttcgtccctgacgagcccctccctggcctccgtgggcagcatgagcgcccactcgccg
ccccagacacacgtcccgacccccaccaacaacaacaacagcagcacaaacaacaacaac
aacggctcctccaccaacagctctagcaacagcactagcaacagcaagagcagcgcgtcg
tcctcgagcgccgccgccgagcgcgtcaagcggcccatgaacgccttcatggtgtggtcc
agaggccagagacgcaagatggcgcaggagaaccccaagatgcacaactcggagatctcg
aagcgcctcggggccgagtggaagctgctgtcagagacggagaagcggcccttcatcgac
gaggccaagagacttcgcgccgtccacatgaaggaacacccagactacaagtacagacct
cggcggaagaccaagaccttgatgaaaaaggacaagtaccccttagcctcgggtctcctc
cccactgaccccacgcgacccccagtgcagcaggtgacccgggatatgtacaacatgacc
aacgggtacatgccgaacggggattatggcgactatggctacgggtacgacagcgccgca
tacgggggtcaaggctacccgtacatgacaggtcaggtgtacggcgggtatgacatgacc
cgcggctactctccgacctcgacctcgaccccgtcttacatgaacgggtcgtacagttct
gctatgtacgcctcagcaccgtctccctattccatgagtcaaatggcttcgatggcatcc
gtaggttccgtcggttccgtgggttcttcggcgtcccactcccccacgcccataaagtct
gagacgcccaccctcccagtctcgtctcctggagcctccatgccaccctcagctagccac
accacaccaggtgattatccaacgagcgtgatgaagcgggagtacgcgccaggccagccg
ggccagcaggacctctcgcagatgatctccatgtacctgccggggtcccaggagcgccat
gagcagcagaaggccgccgccgccgccgcctacatgtcccacgcacactaccacgcccac
gccgcgacttcccccgagcagatgccgcccgcacccatgcctctcacccacatgtaa
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