KEGG   Penaeus vannamei (Pacific white shrimp): 138862409
Entry
138862409         CDS       T06111                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvm04121]
    138862409
Enzymes [BR:pvm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138862409
Ubiquitin system [BR:pvm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    138862409
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_11 zf-ANAPC11 Cast DYH2-5-8_CC CCDC113_CCDC96_CC Tropomyosin NDC80_loop GAS TMF_TATA_bd Zn_ribbon_8 zf-RING_Vps41 zf-RING_16 GOLGA2L5 bZIP_1 DUF4407 Hobbit NTP_transf_5 V_ATPase_I DUF5930 Mis12 Prok-RING_4 zf-RING_4 zf-Nse THOC7 YabA zf-RING_10 CALCOCO1 DUF7615 zf_RING_Vps8 zf-C3HC4_4 COG3_N FANCL_C Fungal_TACC LRS4 zf-RING-like OVT1 FapA Lebercilin Cnn_1N
Other DBs
NCBI-GeneID: 138862409
NCBI-ProteinID: XP_069980577
LinkDB
Position
8:complement(26611938..26621185)
AA seq 184 aa
MRAACVICGDLFIHTDDISATPCGHTFHTVCLIQWIERSKSCPQCRHKATEKSLVKLFFD
SGGADTSHVDPDTLQHQIDSLKFQIRLKEQEMKNFKDNSETLTKQNKGLREECKTITSQL
HAKDTTIMALKSQLQFMDRITKEAQKAKEEAKKLREQLRVLQKYGKRHFYCFLNLKYDFI
ASGL
NT seq 555 nt   +upstreamnt  +downstreamnt
atgcgtgctgcctgtgtaatctgtggggatctcttcatccacacagatgacatctctgca
accccctgtgggcacacattccatactgtgtgtctgatacagtggattgaaaggtcaaaa
tcatgcccacagtgtcgccacaaagctacagagaagagcttggtaaaactgttttttgat
tcaggaggagcagatacatcacatgttgaccctgacacattgcagcaccagattgacagc
cttaagttccaaatccgcttgaaggagcaagaaatgaaaaactttaaggataattcagaa
actttgaccaagcagaataaaggcctcagagaagagtgcaaaactatcaccagccagctt
catgccaaagacactacaattatggctctgaagtcacagctccagttcatggaccgcatc
accaaggaagcccagaaggcaaaagaggaagccaagaaactgagagaacagcttagagtg
cttcaaaagtatgggaagagacatttttattgctttttaaatctgaaatatgattttatt
gcttcaggtctttga

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