Penaeus vannamei (Pacific white shrimp): 138866221 Help Entry 138866221         CDS       T06111                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism pvm  Penaeus vannamei (Pacific white shrimp) Brite KEGG Orthology (KO) [BR:pvm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pvm03000]     138866221    04121 Ubiquitin system [BR:pvm04121]     138866221 Transcription factors [BR:pvm03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     138866221 Ubiquitin system [BR:pvm04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     138866221 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4 zf-CCCH_UNK zf-C3HC4_4 Prok-RING_4 zf_CCCH_4 zf-C3HC4_2 Vesi_VP2 SprA-related PaaA_PaaC Motif Other DBs NCBI-GeneID:  138866221 NCBI-ProteinID:  XP_069994452 LinkDB All DBs Position 24:complement(7322927..7378918) Genome browser AA seq 1060 aa AA seqDB search MPIQAPQWTEFLSCPICCHEFDGGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE LDQLPVNVALLSLVGAGTNVEEGDLPPPPPVPPTHTRKYFIAVKCIKDLALFLKPFSGTG TNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNHQQLSA NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD QWSSLLYGDTAHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPQLELLA ALDPSPDAPPPGWEPCAAAMEAVRAVVTGLVHFIQHHGNRKLPDAHHPHNAKYKTSMCRD LTQRGGCPRGNNCTFAHSEDELEKYRNRSRKHGKGIPQPPPTPATKLQPPPAQTYQQLSH PTQPQQPQQQNVDAVIAPNNGECVAVPVIQKALPVEEIPQAGAVPPAPASFDPNKFVSIQ PHTQAMSVLPAPTPAPAIVQPALAATPLYATPVAEYTYSSFPCQPPVFAQPTPGPQPLQS AAAAAAAAAAAAAAAAVFPGQPTAILPDMYGSNPPVLVNTTPVYNIHGPGSEFCIPVANT SSKGTNSSPLSTWSESTTTTSSASSMSVVSKIANKSIEELKERKEAILNQLENIVGKEAT NRVATEIANGEEPIKSQEFTSTYSIWTSGANFYNVPKMVEKNYDPSTGYRTDIAKKDEAN PKRKDDFIPFDPPIVSRFGPISRMSRSVIRPSNPIQVSASNTTEPATTPTVRRPVPAISP MPQVVYQPGGYTLGFMAYTPTPLDHMNTVGHGILDPPHLHMSQLEPSGMRPSDPVPNTYD GLNPADQEDCFRQQLNSVTEGIETIMVNAHSVAECEEMRLKKELSLVMNGIEVKRKEMEE RVPVQNKRGGGLLAACWSANRLGGHGDCSTPPMSEALIPMVLTLWLIRSPPFPSQQPIHD CFLNITLEKSSRSLSEEEEDKDLGDFEKNWKFDFDEGEKE NT seq 3183 nt NT seq  +upstreamnt  +downstreamnt atgccgatccaggccccccagtggacggagttcctgtcgtgccccatctgctgccatgag ttcgatggtgggcagcgtgggcccatcagccttgggtgtggacacacagtgtgccgtgct tgcctcgccaagctccagcgcaatcagtgtccatatgaccagactgtaatgagactggag ctggaccagcttccggtcaacgttgcgctgctgtcactggtgggggctgggacgaacgtg gaggagggtgacctgccccctcctccaccagtgcccccaactcacacccggaaatacttc atagccgtgaagtgcatcaaagaccttgcactatttctcaaacccttctctggtacagga acaaatggctcaacatcactcctctcccgccctatgcaacgtaagcttgtcaccctcatc aactgccaactagtggaagatgagggcagagccagggcagtccgggcagcacgatcgctc ggggaacgcactgttacagaactcattttgcaacaccagaaccaccagcagctctctgcc aacctctgggctgcagtcagagcaagagggtgccagtttctagggcctgcaatgcaagaa gaggtgctgaagttggtattgttggccttggaagatggatctgctctctctaggaaagtt ttggtcatgttcgttgtccagcgccttgaaccacacttcccacaggcttccaaaacaagt ataggacacgtagtacagttgctttaccgtgcctcgtgtttcaaggtatcaaaacgagag ggtgactcctccctcatgcagttgaaggaggagttccggacgtatgaggcactcagaaga gaacatgacgcccaaattgtccagattgccacagaagctggattaagaatagcacctgat cagtggtcgtccctcttgtatggggacactgctcacaaatctcatatgcaatcaatcatt gacaaactgcaaacccctcagtcatttggtcagtcagtgcaggaattagtgatagcactt cagagaacaggtgaccctggacagctatcctccctccggcctcagctggaattactggca gcactagatccctctcctgatgcaccacccccaggatgggagccttgtgcagctgcaatg gaggctgtacgagctgttgtcacaggacttgtccacttcatacagcaccacggtaatagg aagttaccagatgcacatcatccacacaatgctaaatacaagacaagcatgtgccgggat ctgacacaaagagggggttgtccaagaggtaacaactgcacttttgcgcattcagaagat gagcttgagaagtatcgaaacaggagtcggaaacatggcaaaggcattcctcagccacct ccaacacctgcaacaaagttgcagcctcctcctgcacagacataccaacagctgtcacac cccacacaaccacaacaacctcagcaacaaaatgttgatgctgttattgcccccaacaat ggagaatgtgttgctgttcctgtcatacaaaaggctcttcctgttgaagaaattccccaa gcaggtgcagtgccaccagccccagcctcatttgacccaaataagtttgtttctattcag cctcacactcaggcaatgtcagtcctgccagctcccacaccagctccagccattgtgcaa cctgctttggcagcaacaccactctatgcaactccagttgcagaatatacctatagttct tttccttgccaaccaccggtattcgcacagcctactcctgggccacaacctcttcaatca gcagcagcagcagcagcagcggcagcagcagctgctgctgccgctgctgtcttccctggt cagcctacagctattttaccagatatgtatggctccaatccaccagtgttagtcaataca acacctgtatataatattcatggtccaggaagtgaattttgcattccagtcgctaatacc agctccaaaggaacaaattcctctcccctttcaacctggtctgaaagtacaactactaca agcagtgcttcatctatgtctgttgtttcaaagatagccaacaaatctatagaagaactg aaggaaaggaaggaagctatattgaatcaactcgaaaacattgttgggaaggaagcaacc aatcgtgttgccacagaaattgcaaatggtgaggagccaatcaagtcccaggagttcaca tccacatacagcatatggacctctggtgctaacttttacaatgtgcctaaaatggtagag aagaactacgacccatcgactggctaccgcactgacatagcaaagaaagatgaggccaac cccaagaggaaagatgactttatcccattcgaccctccgatagtcagtcgctttgggccc atctcgagaatgtcaagatcagtgatccgaccttccaaccccattcaggtatctgcaagt aataccactgaacctgccaccacacccactgtaagaagaccagtccctgcaatttcaccc atgccacaggttgtctatcagcctggaggctataccctagggttcatggcatacactcct acgccccttgaccacatgaacacagtgggtcatgggatcctcgaccccccgcacttgcac atgtcccagctggagccctcgggaatgagaccaagtgaccctgtgcccaacacctatgat ggattaaatcctgcggatcaggaggattgcttcaggcagcagctcaactctgtcacagaa gggatcgaaaccattatggtgaatgcgcattcagtggctgagtgtgaagaaatgagactc aagaaagaattgagtctggtcatgaatggaattgaagtaaaacgcaaagagatggaggag agagtacctgtacagaataaacgaggtggaggtttgttggccgcttgctggagtgccaac aggcttggaggccatggtgattgctcgacaccaccaatgtcggaggccctcatacctatg gttctgacattgtggctcatccgatcaccaccatttccatctcaacagcccatccatgac tgcttcttgaatatcacacttgagaaatcaagcaggtctctgtcagaggaagaggaagac aaagatcttggagattttgagaagaattggaagtttgattttgatgaaggtgaaaaggaa taa

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