Penaeus vannamei (Pacific white shrimp): 138867592
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Entry
138867592 CDS
T06111
Name
(RefSeq) homeobox protein six1-like
KO
K15614
homeobox protein SIX1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
138867592
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
138867592
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
138867592
NCBI-ProteinID:
XP_069999861
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Position
31:7677381..7678572
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AA seq
219 aa
AA seq
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MIVGSMSEAVGHPGAPHLAPPTLPPQSSLSPPGAMLPSFGFTQEQVACVCEVLQQSGNIE
RLGRFLWSLPACEHLHKNESVLKAKALVAFHRGNFKDLYRILESHNFSPQNHGKLQQLWL
KAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRNVLREWYAHNPY
PSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKDG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatagtggggtctatgagcgaggcggttggacacccaggcgccccacacctggcaccg
ccgacgctgccgccgcagtcctcgctctccccacccggtgccatgctgccctccttcggc
ttcacgcaagagcaggttgcatgcgtctgcgaagtcttgcaacagagcggcaacatcgaa
aggctaggcagattcctctggtcgctgcctgcgtgcgaacacttacacaagaatgaatcc
gtcctcaaagccaaggccctcgtggccttccaccgtggcaactttaaggacctttaccga
attcttgagtcgcacaatttctcaccgcagaaccacgggaagctccagcagctgtggttg
aaggcgcactatatcgaagcagagaagctccgcgggcggccgctgggcgccgtgggcaag
taccgcgtgcggcgcaagttccctctcccgcgcacgatttgggacggcgaagaaacctcg
tactgcttcaaggagaagtcgcggaacgttttacgggagtggtacgcgcacaacccgtac
ccgtcgccgcgggagaagcgagagctggccgaggcgacgggcctcaccacgacgcaagtg
tccaactggttcaagaaccgccgacagcgagaccgagctgccgaggcaaaagacgggtaa
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