Candidatus Planktophila vernalis: A7sIIA15_00560
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Entry
A7sIIA15_00560 CDS
T05319
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_00560
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A7sIIA15_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA
DnaB_C
ChlI
AAA_22
Lon_C
AAA_16
AAA_30
NTPase_1
nSTAND3
NACHT
AAA_14
AAA_5
ABC_tran
TniB
TIP49
RecA
MCM
DUF7125
IstB_IS21
SLFN-g3_helicase
AAA_24
AAA_29
RsgA_GTPase
KdpD
Fn3_nematode
DAP3
DUF815
Motif
Other DBs
NCBI-ProteinID:
ASY19409
UniProt:
A0A249KRU8
LinkDB
All DBs
Position
complement(106336..107703)
Genome browser
AA seq
455 aa
AA seq
DB search
MAKVEKDPFRCSECGWSSQKWVGRCGECQAWGSVEELAAPKKLSLVPGNVTSKATPIGDV
DLSAAHARPTGVSELDRVLGGGLVPGAAILLAGEPGVGKSTLLLSVAAQTAAKGIPALYV
SGEESASQVRLRAERIKAIDPQLFLASETDLGAVIAHIDAVKPQLLIIDSVQTIGSSTAD
GSPGGVTQVREVAGALIRICKDRDITLLLVGHVTKDGSIAGPRLLEHIVDVVLQFEGERH
SRLRLIRAIKNRFGASDEVGCFDLSDSGIESVLDPTGLFTSRHAEPVPGTCVTVTLEGRR
PLLAEIQALVSQGRENDFGNARRVVSGLDSARTSMTLAVLELRAGVRVGGRDVYAATVGG
MKMSEPAADLALALAVASAAKGLALPSDLVAIGEVGLAGEIRKVSGVDRRLQEAFRLGFK
RALVPTGSETKIAGMEIVEVSRLDQALKRVKITGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagttgagaaagatccattccgctgtagtgaatgcggttggagctcgcaaaaa
tgggttggccgctgcggtgaatgccaagcatggggctcagttgaagagttagctgcgcct
aagaaactctcacttgttcctggaaatgtcacaagtaaagcaactcctattggagatgtt
gatctatctgcagcacatgcacgtcctacgggcgtatcagagctcgatcgcgtacttggt
ggcggattagttccaggtgctgcaatcttgttagcaggtgaacctggagttggtaaatca
acactacttctctcagttgcggcgcaaactgcagctaaaggaattcctgccctctatgtc
agcggtgaagaatcagcatcacaagttcgactacgtgcagagcgcattaaagcaattgat
ccacagttatttctagcatcagagacagatcttggcgcagtcattgctcacattgacgcc
gttaaaccgcagttactcattattgactcagtacaaacaataggtagcagcacagcagat
ggttcacctggtggtgtgacacaagtacgcgaagttgcaggagcacttattcgaatctgt
aaagatcgcgacattactttgcttctagttggccatgtaacaaaagatggctctatcgca
ggtcctagacttcttgaacacatcgttgatgttgttttgcagtttgaaggagagcgtcac
tcacgccttcgccttattcgtgcaataaaaaaccgcttcggtgcatctgatgaagtcggt
tgttttgatttaagtgattcaggaattgaatccgtgcttgacccaactggactctttaca
tcccgccatgcagaaccagttcctggaacgtgtgtgactgtaactcttgaaggtcgccgc
ccattacttgcagagattcaagcccttgttagccagggacgtgagaatgattttggaaat
gcacgtcgtgttgtctctggccttgattctgcccgcacatcaatgactttagctgttcta
gaacttcgcgcaggagtgcgagtgggtggccgtgatgtttatgcagcaacagttggtggc
atgaaaatgtcagagccggccgctgatttagcgttggccttagccgttgcatctgcagct
aaaggtttagctcttccctctgatttagttgcaatcggtgaagttggtctagctggtgaa
attcgtaaggtgagcggcgttgatcgccgtctgcaggaagcatttcgtctaggtttcaag
cgagcgttagttcctacgggttcagagacaaagattgcaggtatggagattgttgaagtt
tcacgtcttgatcaagcactcaaacgggtaaaaatcactggcgaatga
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