Candidatus Planktophila vernalis: A7sIIA15_01325
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Entry
A7sIIA15_01325 CDS
T05319
Name
(GenBank) ribosome biogenesis GTPase
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn00730
Thiamine metabolism
pvn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A7sIIA15_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvn03009
]
A7sIIA15_01325
Enzymes [BR:
pvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
A7sIIA15_01325
Ribosome biogenesis [BR:
pvn03009
]
Prokaryotic type
GTPases
A7sIIA15_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_16
ABC_tran
GTP_EFTU
AAA_29
nSTAND1
AAA_33
AAA_22
Dynamin_N
AAA_30
Septin
AAA_25
FeoB_N
AAA_23
AIG1
ATPase_2
NB-ARC
AAA_19
AAA_21
nSTAND3
Roc
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
ASY19549
UniProt:
A0A249KS79
LinkDB
All DBs
Position
241469..242491
Genome browser
AA seq
340 aa
AA seq
DB search
MSPREYDESDARVRPARSTRPRSKDRPSHSTAISALVTGVDRGRQTCVTDEGVIITAMRA
RELGPKSVVVGDRVSIVGDVTGDEGSLARIVSVNERRNSLSRTVDDAAQVERTIVANVDQ
LVIVVAALNPEPRRGLIDRFLVSAFTEGITPKLVVTKTDLGVVPEFLAEYAKLDVEILHT
AIKSDSREKDLEALHQMLSGKISVLVGHSGVGKSTLINALVPDADRLTGDVNEATGRGRH
TSSSAVALALDTHDGWIIDTPGIRAFGLSHIDVSRIVDAFTDLSLVAATCLSNCSHAESS
CKLDAWAAPNGVVDPERAARLSSLRSLLSVKDQAVFVPED
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacgcgaatacgatgaatcagatgcgcgcgtaaggcctgcgcgcagcacacgt
ccacgaagtaaagatcgtcctagccactccactgctatttcagcacttgtcactggagtt
gatcgcgggcgacaaacatgtgttactgatgaaggcgtcattatcactgcaatgcgtgca
agagaacttggacctaaatctgttgtggtgggcgatcgagtttctattgttggtgatgtt
accggcgatgaaggaagtttggctcgcatcgtttcagtcaatgagcgcagaaactcactg
agcagaactgttgatgatgctgctcaagttgagcgcacaattgttgccaacgtagatcaa
cttgtcattgttgttgcagcccttaatcctgaaccacgacgtggtctcattgaccgtttt
cttgtttcagcctttaccgaaggtattacgccaaagttagtagtcactaaaacagatttg
ggagttgttccagagtttctagctgagtatgcaaagttagatgttgaaatcctgcacact
gcaattaagagtgattctcgtgagaaagatttagaagcgttacaccagatgctttcaggc
aaaatctctgtactcgttggtcattcaggtgttggtaaatcaacacttattaacgcactt
gttccagatgcagatcgcttaactggtgatgtgaatgaggcaacgggtcgtggtcgacac
acatcatctagcgcagttgcacttgcactagacacacacgatggatggattattgataca
ccaggaattagagcattcggactctcgcatatcgatgtcagtcgaattgttgatgccttc
acagatctctctcttgtagctgcaacatgtttgtcgaattgctcacacgctgaaagctct
tgcaaacttgatgcatgggctgcgcctaacggggtagttgaccctgagagagcagccaga
ttaagcagccttcgttcgttgttatcggtcaaggaccaagcagtatttgtgccagaggat
tag
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