Candidatus Planktophila vernalis: A7sIIA15_01610
Help
Entry
A7sIIA15_01610 CDS
T05319
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn00260
Glycine, serine and threonine metabolism
pvn00460
Cyanoamino acid metabolism
pvn00630
Glyoxylate and dicarboxylate metabolism
pvn00670
One carbon pool by folate
pvn00680
Methane metabolism
pvn01100
Metabolic pathways
pvn01110
Biosynthesis of secondary metabolites
pvn01120
Microbial metabolism in diverse environments
pvn01200
Carbon metabolism
pvn01230
Biosynthesis of amino acids
pvn01240
Biosynthesis of cofactors
pvn04981
Folate transport and metabolism
Module
pvn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A7sIIA15_01610
09102 Energy metabolism
00680 Methane metabolism
A7sIIA15_01610
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A7sIIA15_01610
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A7sIIA15_01610
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A7sIIA15_01610
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A7sIIA15_01610
Enzymes [BR:
pvn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A7sIIA15_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
DUF1815
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ASY19598
UniProt:
A0A249KS13
LinkDB
All DBs
Position
295270..296529
Genome browser
AA seq
419 aa
AA seq
DB search
MSTYYGPDFDALSKQDPEIAAVLLSEMTRQQKNLQLIASENFTSRAVLAAIGSTLSNKYA
EGYPGKRYYGGCEEVDKAENLAIERAKSLFGADHANVQPHSGASANIAIYQAFTKPGDTV
MAMSLAHGGHLTHGSPVNFSGKWFNIESYGVRSDNELIDYDELRDKAIATKPKMICSGAT
AYPSLIDFEKVRAICDEVGAIMWVDAAHFIGLVAGKAIPSPVPYADVVSFTTHKVLRGPR
GGMILAKAEHAAAIDKSIFPGMQGGPIMSAVAGKAVALAECATPAYQKYAKDVIVNAQAL
AKALEAEGMRAVSGGTQTHLALMDIRSTGVTGKVADERCGAAGIVMNKNSIPNDPEKPGI
TSGIRVGTPSTTTQGMGVEEMKQIATLIARAIATDDASAHSAIKSEVHALTSRFPIYQG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttactatggcccagatttcgacgcattaagcaagcaagatccagagattgct
gctgttctgctctctgagatgacacgtcagcaaaagaacttgcagttaattgcttcggag
aacttcacctctcgcgcagtgctggcagccataggttcaactctttctaataaatacgcc
gaaggttatccaggcaagcgttactacggtggatgcgaagaagtagataaagcagaaaac
ttagcaatcgagcgcgctaaatctctttttggtgcagaccatgcaaacgttcaaccgcac
tctggtgcaagtgccaacatcgccatttaccaagcatttactaagccaggagataccgtc
atggcgatgtctttggcacatggtggtcacttaacgcatggatctcctgttaacttttca
ggcaaatggttcaacattgagtcatacggtgtgcgcagcgataacgagttaattgattat
gacgagctgcgagataaggcaattgcaacaaagccaaagatgatttgttctggtgcaact
gcttatccatcacttattgattttgagaaggttcgtgcaatttgtgatgaagtaggagca
atcatgtgggtagatgctgctcacttcattggtctcgttgcaggaaaagccattccctcc
ccagttccttatgctgatgttgtttctttcactacacataaagttttacgtggaccacgc
ggtggaatgattttggcaaaagctgagcacgcagctgcaattgataaatcaatcttccct
gggatgcagggtggaccgattatgtctgcagtggctggtaaagctgttgctttggcagag
tgtgcgactcctgcatatcaaaagtatgccaaggatgtaattgttaatgcccaggcctta
gctaaggcccttgaagcagaaggcatgcgagcagtatctggcggtactcaaactcactta
gcgctaatggatattcgaagcacaggagtaactggaaaagttgctgatgagcgttgcgga
gcagctggaattgttatgaataagaactcaattccaaatgatccagaaaagccaggaatt
acaagcggtattcgtgttggcacaccatcaacgactacccaaggaatgggcgttgaagag
atgaagcagattgcaactttgattgcgcgcgcaattgctaccgatgatgcctcagcacat
tctgcgattaagagcgaagttcatgctctgacatcacgctttcctatctaccaggggtaa
DBGET
integrated database retrieval system
