Candidatus Planktophila vernalis: A7sIIA15_02545
Help
Entry
A7sIIA15_02545 CDS
T05319
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvn03016
]
A7sIIA15_02545
Enzymes [BR:
pvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A7sIIA15_02545
Transfer RNA biogenesis [BR:
pvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A7sIIA15_02545
Prokaryotic type
A7sIIA15_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
Motif
Other DBs
NCBI-ProteinID:
ASY19770
UniProt:
A0A249KSI7
LinkDB
All DBs
Position
484503..485336
Genome browser
AA seq
277 aa
AA seq
DB search
MTSHDVVAIARRALGTRKVGHAGTLDPMATGILVLGFNNGTRLLQYITNGDKTYEATVVL
GAATVTDDVEGEVISRADVSAITDAQIEAEMAKMRGTIMQRPSSVSAVKVDGERAYDRVR
AGESVELAAREVTISQLDIKDVRRIESAIEVDIEVTCSAGTFIRAIARDCGNALAVGGHL
NSLRRTRVAGFGLDKSISLTALKAGEFSTLGLVDVARTTFSARELALDEVNELSFGRPLS
ANPDEAIYAAISGQDLIALLCNKDGLAKPIAVFAAAN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccacgatgttgtggctatcgctcggcgcgcacttggtacacgcaaggttggc
catgccggaactcttgatccaatggccacgggtattttggttttaggttttaacaacggc
acgcgcttgcttcaatacatcacaaatggcgacaagacctatgaagcaactgttgtttta
ggtgctgcaacagttacagatgatgttgaaggtgaagtcatttcacgcgcggatgtctca
gcaatcactgatgcgcaaatagaagcagagatggcaaagatgcgtggaaccatcatgcaa
cgcccaagttcagtatcggccgtgaaagttgatggtgaacgagcatatgatcgcgtgcga
gcaggagaaagcgttgaacttgctgcccgcgaagtaacaatctctcaattagatatcaaa
gatgtgcgccgaattgaaagtgcgattgaagttgatattgaagtgacttgttctgccgga
acatttatccgcgccattgctcgagactgtggaaatgcacttgcagtaggcggacacttg
aattcgctgcgtcgcacacgtgttgctggctttggtttagataaatccatctctcttaca
gcacttaaggctggggagttttcaacccttggattagtagatgtcgcacgaacaacattt
agcgcgcgtgagctggcacttgatgaagtcaatgaactttcctttggtcgcccgctcagt
gctaacccagatgaagctatctatgcagcaatttctggtcaagatctcattgcactgctg
tgtaacaaggatggtttagctaaacccatcgccgtattcgcggcagctaactag
DBGET
integrated database retrieval system
