Candidatus Planktophila vernalis: A7sIIA15_02615
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Entry
A7sIIA15_02615 CDS
T05319
Name
(GenBank) endonuclease VIII
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvn03009
]
A7sIIA15_02615
Enzymes [BR:
pvn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A7sIIA15_02615
Ribosome biogenesis [BR:
pvn03009
]
Prokaryotic type
ribosomal protein modification factors
A7sIIA15_02615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ASY19783
UniProt:
A0A249KSK4
LinkDB
All DBs
Position
498860..500215
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AA seq
451 aa
AA seq
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MKRTVAVVTLGCSRNEVDSEELAGRLAADGWTLVDDVESAEVALVNTCGFIESAKKDSID
TLLEANSLKGHGQTRAVVAVGCMAERYGNELAEALPDTDAILSFDDYQDISARLQSIVAG
NSHTPHIPRDRRALLPIAPADRAETRENSEFSRKRLGDAPWAPLKIASGCDRRCSFCAIP
YFRGSFISRRPHEVLDEARWLVANGVTELFLVSENTTSYGKDLGDLQLMEKMLPEIAAIE
GVERVRLSYLQPAEMRPTLIQAMIATPKTVPYFDLSFQHSSPTVLRRMRRFGDNEKFLHL
INQIRVLSPEAGIRSNFIVGFPGETQEDFDELARFITEAKLDAVGIFGYSDEDNTEALKI
DGKIDEAVIAQRVETLSSLADEMVSLRAQARIGETIRVLIEDAELQEGRAAHQGPEVDGS
TTFIGTDFTVGQYVDAVVIDSMGADLVAKPL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaccgtagcagtcgtcactttagggtgctcacgaaatgaagttgattcagaa
gagctggctggtcgtttagcagccgatggttggaccctggttgatgatgttgaatcagct
gaagttgcactagttaatacatgtggatttattgagtcagctaaaaaggattcaattgac
actctgcttgaggcaaactcactcaaaggtcatgggcagacgcgtgcagttgtagcagtg
ggatgtatggctgagcgttatggaaatgaattagccgaagcacttccagatactgatgca
atattgagctttgatgactatcaagatatctctgcacggttgcagtcaatcgttgcaggt
aattcacacacgcctcatattccacgtgatcgtcgcgctctcttgcctattgctcctgct
gatcgcgccgaaactcgtgaaaactctgaattttcccgcaaacgtttaggggatgcgcct
tgggcgccacttaaaattgcatcgggctgtgatcgtcgctgttcattctgtgcgattcca
tactttagaggctcatttatttcacgccgcccccacgaagtcttggatgaggcacgttgg
ttagttgccaacggtgtgacagaactcttcttagtcagtgaaaatacaacttcgtatgga
aaagatttaggcgatctgcagttaatggaaaagatgctgcctgagattgctgctattgaa
ggagttgaacgggttcgcctttcctacttacagcctgcagagatgcgaccaacgctgatt
caggccatgattgcaacaccaaagactgttccttattttgatttatctttccagcattca
tcgccgacagttctgcgccgcatgcgccgctttggcgataatgaaaagtttctccattta
atcaatcagatccgagtcttatctccagaggctggaattcgctcaaacttcattgttggc
tttccaggtgagacacaagaggattttgacgagttagctagattcattactgaagccaag
ttagatgctgttggcatctttggttattctgatgaagataacaccgaagcgctaaagatt
gatggcaaaattgatgaagcagtgattgctcagcgcgtggagacactttcttccttggcc
gatgaaatggtttctttgcgcgcacaggctcgtatcggtgaaactattcgtgttttgatc
gaagatgccgaactacaagaaggacgagcagctcatcaaggtccagaagttgatggaagt
actacttttatcgggacagattttacagtggggcagtatgttgatgctgtggtgattgat
tcaatgggtgctgatttggtggcaaagcctctatga
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