Candidatus Planktophila vernalis: A7sIIA15_03550
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Entry
A7sIIA15_03550 CDS
T05319
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A7sIIA15_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_03550
Enzymes [BR:
pvn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A7sIIA15_03550
DNA repair and recombination proteins [BR:
pvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A7sIIA15_03550
Prokaryotic type
A7sIIA15_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASY19953
UniProt:
A0A249KT16
LinkDB
All DBs
Position
670937..671575
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AA seq
212 aa
AA seq
DB search
MGIFDQLHPEWQKRLADYKPLVTRIDSLIDKNDVAPAYENIFAAYQLPPDDIRVAIFGQD
PYPTPGYAHGLAFSVSSHTQPLPASLRNIYKELENDCGVTPATNGDLHRWADQGVLLLNQ
ILTTRPTQSLAHENYGWQEFTEATAKIVGESGAIGIFWGSKAQHFAKYFDPKLSISSAHP
SPLSAYRGFFGSAPFSKTNELLRQSGKREVIW
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggggatttttgaccagcttcatccagagtggcaaaagcgtttagctgattacaaacca
ttagtaacaaggattgattcactgattgacaaaaacgatgttgctccggcttatgaaaac
atttttgccgcctatcaactgccaccggatgacattagggtcgcaatattcggacaagat
ccatacccaacacctggttatgcgcacggtttagctttttcagtctcatcacacacgcaa
cctcttcccgcgtcattgagaaatatctataaagagcttgagaatgattgcggcgtgacg
ccagctactaatggagatctccatcgctgggctgatcagggcgttttgttgctcaatcag
atccttacgacccgtccgactcaatctcttgcccatgagaattatggttggcaagagttc
acggaggccacggccaaaatagttggtgaatctggagctatcggaatattttggggatca
aaggcgcaacattttgccaagtactttgatcccaaactctctatatcttcggcgcatcca
agtccgttatcggcatacagaggattctttgggtcagcgcctttttcaaagaccaacgaa
ctacttcgtcagagcggcaagagagaagttatctggtaa
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