Candidatus Planktophila vernalis: A7sIIA15_03670
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Entry
A7sIIA15_03670 CDS
T05319
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvn03019
]
A7sIIA15_03670
Enzymes [BR:
pvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A7sIIA15_03670
Messenger RNA biogenesis [BR:
pvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A7sIIA15_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
DUF5669
AAA_22
IstB_IS21
CitG
Motif
Other DBs
NCBI-ProteinID:
ASY20624
UniProt:
A0A249KV43
LinkDB
All DBs
Position
691406..693781
Genome browser
AA seq
791 aa
AA seq
DB search
MTTPAEKFAAAKVRNQYKETTAFVQSFDFEFDPFQVAACHAVEEGSGVLVAAPTGAGKTV
VGEFAAHLALKLGKKCFYTTPIKALSNQKYSEFVAMFGEDRVGLLTGDTSINGEADVLVM
TTEVLRNMLYAGSNTLTNLGYVVMDEVHYLADKFRGAVWEEVLIHLMESVQVISLSATVS
NAEEFGEWLGEVRGNTQVIVSEIRPIPLYQHVLIGNRLLDLFDKPGQINPEILQREREAV
RKAAISRHRRGRFNEAQDRLSRADIIEKLANQNLLPAITFIFSRIGCDAAVKQCLHAGLR
LTSTAEREEIRATALKYTQNIAEEDLVVLGFDEWLSALERGIAAHHAGLLPSFKSAVEEL
FQKGLIKAVFATETLALGINMPARTVVLEKLIKYNGESHVPITPGEYTQLTGRAGRRGID
IEGNAVIQWSPTVDSASAAGLASTRTYPLRSSFAPTYNMSINLIARFGRERARRSLESSF
AQFQADRAVVGLSRQIAKNEAAIEELLSQAVCHLGDFLEYAGIRREIKEVETLLSKRDHK
KTFDNRQRARLEGDLTDLRKGLRNHSCHSCAQREDHSRFAEKAGRLNRENDGLRTRVQSR
THVIAKTFDQICQVLTHLGYIEGEKPTSQGKILTKIYAESDLLLTEAIRRGILDELNAPE
LLSVVSTMIFESRNADNVAPKMPSPRVSSALADVISIWAELEELETEYGVKTQRQPDAGF
CWVSYRWANGNSLQNVLKGTDMSVGDFVRSTKQLSDLLNQIAAASEKLRPVCKDAVKRID
RGVVAFLMGDL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacaactccagcagagaaattcgcagccgcaaaagtccgcaatcagtacaaagagact
acggcttttgtccaaagttttgattttgagtttgatccctttcaagttgctgcttgtcac
gcggtagaggagggcagtggtgtcttagtagctgcaccaactggtgctggaaagactgtg
gttggagaatttgcagcgcacttagctctcaaacttgggaagaagtgtttctacaccaca
ccgattaaggcgctttctaatcagaaatattcagagtttgtagcaatgtttggtgaagat
cgagtaggtctgctaactggagacaccagcattaatggtgaagccgatgtgttagtgatg
acgaccgaggttttacgcaacatgctctatgccggttcaaatacccttaccaacttgggt
tatgtggtcatggatgaagtgcactacttggcagataagtttagaggcgcagtctgggaa
gaagtactgatccatctgatggagagtgtgcaggttatttcgctttcagcaacggtttct
aacgcggaagagtttggtgagtggctcggtgaagtacggggcaatacacaagtcattgtg
agtgaaatccgacctattccgctatatcaacatgtgctaatcggcaatcgattgttggat
ctttttgataaaccaggacagattaatcctgaaattctccaacgcgagagagaagcagtg
cgcaaagctgccattagtagacaccgacgaggccgctttaacgaggctcaagatcgattg
tctcgagccgacatcatcgaaaaactagccaatcaaaacttgcttccggcaatcactttt
atcttctcgagaattggttgcgacgcagcggtcaagcaatgtctgcacgcgggtctgcgt
ctaacctcaactgctgagcgtgaagagattcgtgctacagctctgaagtacacccaaaat
attgccgaagaagatttggtggtcttgggctttgacgagtggctgagcgcattagaacgt
ggaattgccgcccaccatgctggattgttaccgagttttaaatcagcagtcgaggagcta
tttcaaaaagggttgatcaaggctgttttcgcaactgaaacacttgcactaggcatcaac
atgccagccagaactgttgttctagagaagttgattaaatacaacggtgagtcacatgtg
ccaatcacaccaggggagtacacacagttaactggacgagctggccgacgcggcattgat
attgaaggcaacgcagtcattcaatggtctccaactgttgattcggcttcagctgctggt
ctggcatctacacgtacatatccactgcgttcatcttttgcccccacctacaacatgtca
atcaatctcattgcaagattcggtcgcgaacgcgcacgtcgttccctcgagtcatcattt
gcacagttccaagcagatcgcgctgttgttggtttatcgcgacagattgctaagaatgaa
gcggcaattgaagaactactctcacaagcggtctgtcacctgggggattttctggagtat
gcgggcattcgccgtgaaattaaggaagttgaaactcttctttcaaagcgtgatcacaag
aaaacttttgataatagacaacgcgcacgtcttgaaggagatctaacggatctacgtaag
ggccttagaaatcacagctgccattcgtgcgcccagcgagaagatcattcacgttttgcc
gaaaaagcgggtcgccttaaccgtgagaatgatggtcttcgcactcgcgtgcaaagtcgc
acacacgttattgcaaaaacttttgatcaaatttgccaggttctgactcatcttggttac
atcgaaggggaaaaaccaacttcgcaaggcaagattcttaccaaaatttatgcagaatca
gatcttctcttgaccgaggcaatccgtcgaggaattctcgatgaactaaatgccccagag
ctgctatcagttgtgtcaacgatgatttttgaatctcgcaacgccgacaatgttgctcct
aagatgccaagtccgcgagtttcgagcgcacttgccgatgtgatatccatctgggcagag
ttagaagaacttgaaaccgagtatggagtcaagacacagcgccaaccagatgctggtttc
tgctgggtttcataccgttgggccaatggaaattcgttacaaaacgttctcaaaggcacg
gatatgtctgtgggagattttgtccgaagtacgaagcaactttctgatctgctcaatcaa
atcgctgctgcaagtgaaaagcttcggccagtatgcaaagatgctgttaagcgcatcgac
aggggagtggttgcattccttatgggagatctatga
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