Candidatus Planktophila vernalis: A7sIIA15_04175
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Entry
A7sIIA15_04175 CDS
T05319
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03030
DNA replication
pvn03430
Mismatch repair
pvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7sIIA15_04175
03430 Mismatch repair
A7sIIA15_04175
03440 Homologous recombination
A7sIIA15_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvn03032
]
A7sIIA15_04175
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_04175
Enzymes [BR:
pvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7sIIA15_04175
DNA replication proteins [BR:
pvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7sIIA15_04175
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7sIIA15_04175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
ASY20065
UniProt:
A0A249KTN0
LinkDB
All DBs
Position
complement(798892..802389)
Genome browser
AA seq
1165 aa
AA seq
DB search
MTSENFVHLHVHTEYSMLDGAARVPDLMQEVVRQGMPAIAMTDHGNVFGAYEFYKQAKKA
GVKPIIGIEAYVAPESRFDKKRVQWASGGEDDVSGGGAYTHMTILAENNVGLGNLFRLSS
LASLEGYYYKPRMDRELLAQYSKGLIATTGCPGGEIQTRLRMGAYKEAIKAASDYRDIFG
EGNFFLEVMDHGIDIETRVKADLLKLGKELGLPLLATNDLHYTLQADSGAHEALLCVQSG
STLADPKRFKFDNDSFYVKTPAQMRELFKDIPESCDNTLLIAERCDVTMRENENLLPQFS
VPAGETEDSWLKKEAVRGMKERLGDKLTPAHESRLDYELGVMEKMGFPGYFLVVADLVGH
AKKVGIRVGPGRGSAPGSLVAYSLGITGLDPLEHGLLFERFLNPERISMPDIDLDFDERR
RSEMIRYATNKYGEDRVAQIITYGTIKSKQAIKDSTRVLGYPYVIGEKLTKALPPSVMGK
DISLGGIFDSKDDRYGEAGEFRSLYESDPDSKRVVDTARGLEGLKRQWGVHAAGVILSRE
PLLDVIPIHRREADGAIITQFDMGACESIGLLKMDFLGLRNLSVLDDALLNIKENQNIDV
VLEDLKLDDKKTYELLSRGDTLGVFQLDGGPMRALLKSMSPDSFEDISAVIALYRPGPMG
ENAHNNYADRKNKRKPVEPIHQELSEPLHEILGDTYGLIVYQEQVMAIAQKVAGFSLGRA
DLLRKAMGKKNKDILDKEYIPFEAGMQANGFSTAAIKRLWDVLIPFSDYAFNRAHSAGYG
VVSYWTAYLKTNYPTEYMAALLTSVRDDKDKSALYLSECRRMGINVLPPDVNESNGEYTP
RGKDIRFGLAAIRNVGEGVVASIKAARESKGRFTSFGDFLAKVDAQVCNKKTIESLIKAG
AFGSLGATRKGLIAVHLEAIDSVIESKRAEAIGQFDLFGGEAITEVSGLDIEIPTGEWDK
AMLLSYEREMLGLYVSDHPLLGVEHVLRANTDMSISELVDEGAQHESVVTIGGLITSVTR
KVSRQGASWAVVTIEDLEGSLEVLFFSNTYNQYSMSLTEDRIVTVRGRVDRREENLRFTA
LEMSMPDISAGPTGPLVISIPMSQCTPPVVDRIKEILRSHPGKREVHLSLSENGSSTVMK
IDASVTASPSLSADLKSILGPNCLV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgagaatttcgtacatctgcacgtccataccgagtattcaatgctcgatggc
gcagcgcgtgttcccgatttaatgcaagaagttgtcagacaaggcatgccagcaattgca
atgacagatcatggaaatgtttttggtgcttatgagttttataagcaagcgaaaaaagct
ggtgttaagccaatcattggaattgaagcctacgttgcccctgaatctcgctttgataaa
aagagagtgcagtgggcaagtggtggtgaagatgatgtttccggtggcggtgcttacacg
cacatgacaattttggctgagaataatgttggtctcggcaatctctttcgtctatcttct
cttgcatcccttgaaggttattactacaagccccgcatggatagagaacttctagctcag
tattccaagggattgattgcgactacgggttgcccaggtggagagatccaaactcgtttg
agaatgggtgcatataaagaggcaataaaggctgcaagtgattatcgagatatttttggt
gaaggcaatttctttttagaggtaatggatcatggaattgatattgaaactcgcgtcaaa
gctgacttgctcaagcttggaaaagagttaggccttccacttcttgcaaccaatgatctg
cactacacattacaagcagactctggtgcacatgaggctctgctctgcgttcaatctggt
tctacattggcagatcccaagcgatttaaattcgataatgactctttctatgtcaaaact
ccggcacagatgcgagagctctttaaggacattccagagagttgcgataacacattactt
attgccgagcgctgtgatgtgactatgcgagaaaatgaaaatctccttccgcaatttagt
gttccagctggagagacggaagattcttggcttaagaaggaagccgtgcgcggcatgaag
gagcgtttgggggacaagctcacacctgcacacgaatctcgtcttgattatgaactaggt
gtgatggagaagatgggttttcctggttacttccttgttgttgctgacttagtaggacat
gcaaagaaagttggtattcgggttggaccaggtcgaggatcggctccaggttcactggtt
gcttattcacttggtattactggtttagatccacttgaacatggacttttgttcgagcgc
tttcttaatccagaacgtatctctatgcctgatatcgacttggactttgatgagcgtcgt
cgcagcgaaatgattcgttatgcaacaaataaatatggcgaagatcgggttgctcagatc
atcacttatggaaccattaaatccaagcaagcgattaaggactcaacacgcgttctaggt
tatccatacgtcattggtgagaagttaacaaaggctttgccgccatcggttatgggtaaa
gatatttctcttggtggaatctttgattctaaagatgatcgctacggtgaagcaggggag
ttccgatcactgtatgaatcagatccagattcaaagcgagtggttgatacggcccgtggt
cttgaaggattaaagcgccagtggggtgttcacgcagctggagttattctctctcgcgaa
ccattactcgatgtcattccaatccatcgccgcgaagcagatggcgcaatcattactcag
tttgatatgggtgcatgtgaatccattggcttactcaagatggacttcttgggccttcga
aacctctctgttctagatgatgcgctgctcaacattaaagagaaccaaaacattgatgtg
gtgttagaggatttaaagctcgatgataaaaagacatatgaactgctctcacgcggtgac
actctgggtgtgttccagctcgatggtggaccaatgcgtgcgttgctcaaatctatgtca
ccggattcttttgaagatatttcggctgttatcgctctctatcgtccaggtcctatgggt
gagaatgcacataacaactacgccgatcgcaaaaacaagcgaaagccagttgaacctatt
caccaagagctatcagaacctttgcacgaaattcttggtgacacatacggcctaattgtt
tatcaggaacaagtaatggctattgcacaaaaggttgctgggttctcactcggacgtgca
gatcttttgcgtaaggcgatgggtaagaagaacaaagatattttggataaggaatatatt
ccttttgaagcgggtatgcaggccaatggtttctcaactgctgctatcaaacgcttatgg
gacgttcttattccattctctgattacgctttcaaccgagcacactcagccggctatggt
gttgtgtcatattggacggcttatttaaagactaactacccaactgaatacatggctgcg
ctgttgactagcgttcgagatgataaagataaatctgccttgtatttaagtgaatgccgc
cgtatgggaattaatgtgttgccaccggatgtcaatgaatcaaatggtgaatatacccct
cgtggaaaagatattcgctttggtcttgcagcaattagaaatgttggtgaaggcgttgtt
gcatccattaaagctgcgcgtgagagtaaaggtcgattcacatcctttggtgatttctta
gcaaaagtagatgcgcaagtgtgtaacaagaagacaattgaatccttgattaaggcggga
gcttttggctcacttggagcaactcgtaagggcttgattgctgttcacttggaggcaatt
gattctgttattgagagcaagcgtgctgaggccattggacaatttgatttatttggtgga
gaagccatcactgaggtttcaggattagatattgagatcccaactggtgagtgggataag
gcgatgctgcttagctatgagcgcgagatgctgggtctctatgtttccgatcatccactt
ttaggcgttgaacatgtgcttcgcgcaaatacagatatgtctatcagtgaattagttgat
gaaggcgcgcaacatgaatcagttgtcactatcggcggcttaatcactagcgttactcgc
aaggtttcaaggcaaggagcttcatgggccgtagtaacaattgaagatcttgaaggatct
ttggaagttctcttcttctcaaacacctacaaccagtattcaatgtcgctaactgaggat
cgaattgtgactgttcgtggtcgcgttgatcgccgtgaagagaacctgcgatttacagcc
cttgaaatgtctatgccagatatttctgcaggtcctacaggtcctcttgtgatttcaatt
ccaatgtctcagtgcacgccacctgtggttgatcgcattaaggaaattttgcgttcacat
ccaggtaagcgagaagtgcatctgtcattgagtgaaaatggcagcagcacagtaatgaag
attgatgcatcggtcacagcttctccatcactgagcgcagatctcaaatctattcttggg
cctaactgcctggtttaa
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integrated database retrieval system
