Candidatus Planktophila vernalis: A7sIIA15_04505
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Entry
A7sIIA15_04505 CDS
T05319
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvn03032
]
A7sIIA15_04505
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_04505
Enzymes [BR:
pvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A7sIIA15_04505
DNA replication proteins [BR:
pvn03032
]
Prokaryotic type
DNA Topoisomerases
A7sIIA15_04505
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7sIIA15_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DUF4890
RPAP1_N
Motif
Other DBs
NCBI-ProteinID:
ASY20126
UniProt:
A0A249KTM8
LinkDB
All DBs
Position
866456..867988
Genome browser
AA seq
510 aa
AA seq
DB search
MATAKTPAKTAAKGKKPVGPKPGEYPGKIVDIDVSKEVSESFLEYAYSVIYSRALPDARD
GLKPVHRRILHQMADMGLRPERGHVKSARVVGEVMGKLHPHGDGAIYDALVRMAQSFSMR
LPLIDGHGNFGSLDAGPAAMRYTEARLASAAMAMVAEADENTVDFGPNYDGQLAEPLVLP
AAYPNLLVNGGSGIAVGMATNMAPHNLGEVIAATKFLIENPSATVKQLMKFVPGPDFPTG
GELVGLDGVREAYATGKGSFKVRASVEIEKVSTRKMGIVIKELPFTIGPEKVVERIAALV
KAKKIQGISDIIDLTDGQTGTNVVIEIKNGFEPEAVLEQLYALTPMEDAFSINAVALVKG
KPQTLGLKELLKVFIEHRIEVVRRRSEFRKAKAEGRLTLVDGLLKAIIDIDKVIKIIRGS
DDAAAAKEKLMKDFKLNDEQTTYILDMPLRRLTKMSKLELETEQKELKATIAELAKLLKS
EDAIKAQVSDELTAVGKSFATARKTRIGAA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcgaagactcccgcgaaaactgcggcaaaggggaaaaaacccgtcggtcca
aaacctggtgaatacccaggcaagatcgttgatatcgatgtttcaaaggaagtttcagaa
tcttttcttgagtatgcatactcagtaatttattcacgcgcacttcctgatgcacgtgat
ggtttaaagccagttcaccgtcgcatcttgcatcagatggcagatatgggacttcgccca
gagcgcggacatgttaagagtgcacgtgttgttggtgaagtaatgggtaagttgcaccct
cacggagatggcgcaatttatgacgcacttgttcgtatggcgcaatctttctcaatgcgc
cttccactcattgatggtcacggaaactttggatcacttgatgccggtcctgcagcaatg
cgctataccgaagcccgccttgcatctgctgcaatggcaatggttgcagaagctgatgag
aacaccgttgactttggtccaaactatgacggtcagttagctgaacctcttgttcttcct
gctgcttatcccaacctgcttgttaacggcggttctggaattgctgtgggaatggcaacc
aacatggctccacataatctgggtgaagtcatcgctgcaactaagttcttaattgaaaac
ccatctgccacagtcaagcagttaatgaaattcgttcctggtccagattttccaacgggc
ggagaacttgttggccttgatggcgtgcgcgaagcgtatgcaacaggtaagggctccttt
aaagtccgtgcaagtgttgagatcgaaaaggtctccacacgcaaaatgggaattgttatt
aaagaacttcccttcacaatcggacctgaaaaagtcgttgagcgcattgcagcccttgtt
aaagctaagaagatccagggaattagcgacatcatcgatctaactgatggccagactggc
accaacgtagttattgagattaagaacggctttgagccagaagccgtcctagaacagctc
tatgccttaactccaatggaagatgccttctccatcaatgctgtggcattggtgaaagga
aagcctcagactcttggattaaaagagctgcttaaagtcttcattgaacaccgcattgaa
gttgtgcgtcgtcgctctgagttccgcaaagcaaaggctgaagggcgcttaactcttgtt
gatggactcttaaaggcgattatcgatatcgataaggtcatcaagattatccgtggcagc
gatgatgcagcagctgctaaagagaagttaatgaaggactttaagttaaatgatgaacaa
actacctatatcttggatatgccacttcgtcgtttaacaaagatgagcaagctagaactt
gaaacagagcaaaaagagttaaaagcaacgattgcagaactggctaaactgctaaaaagt
gaagatgcgatcaaagcacaggtttcagatgaattaaccgcagttggtaagtcatttgcg
accgccagaaaaactcgaattggcgctgcctaa
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