Candidatus Planktophila vernalis: A7sIIA15_04645
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Entry
A7sIIA15_04645 CDS
T05319
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pvn
Candidatus Planktophila vernalis
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_04645
Enzymes [BR:
pvn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
A7sIIA15_04645
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
A7sIIA15_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ASY20149
UniProt:
A0A249KTZ5
LinkDB
All DBs
Position
894308..895780
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AA seq
490 aa
AA seq
DB search
MKRILYIPFDHLHRNYGALKDADPKEDVIALVESERMSTGRSWHKERLFFLISSARHFAK
SLEDEGFSVEYTKAPTTIDGLDEINKKYKKLPITCAEPSSFRAFNDLKTHGVTFIDNDFF
LTPRPLFNQWASEQKSYLMENFYRKQRTRLNILMEGKDPVGGAWNFDKENRLPPPKKYEG
PKYLEHKRDEIDKQVAKELEHTPTTAWATTRKGALAQLKNFIDNHFADFGPLEDAMTVDN
WALHHSLLSPYLNNGLLHPTEVIHAAMKAFKTGSVPIESAEGFIRQVIGWREYVNGMYWF
LGPDYRNNNQLAATRPLLPLFSDPSKTQMNCMKQTVTDINDRAWVHHIPRLMLLSNLALI
TGTNPQAFLDWMREVFIDASEWVMVPNVIGMGVHADGGQMMTKPYAAGGAYISRMSNYCK
GCSYNPKLRVGDDACPFTTLYWDFLDRHKEAFAKNHRMSQQVFGLNRLSDLPELKERAQE
VLEGLQKGTI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatcctctatatcccctttgatcacctgcaccgcaattacggcgcactcaaa
gatgccgaccccaaagaggatgtcatcgccttagttgaaagcgaacgcatgagcacaggg
cgctcttggcacaaggagcgcctgttctttcttatctcctccgcccgccactttgccaaa
tcccttgaagatgaaggcttcagcgttgaatacaccaaagccccaacaactattgatggg
ttggatgagataaataagaagtataaaaagctacctatcacctgcgcagaaccttcctct
tttagagcatttaatgatctaaaaacacacggtgtcacatttattgataatgacttcttt
ttaaccccacgtcccctgtttaaccaatgggcatcagaacaaaagagctatctgatggag
aacttctatagaaagcagcgcacgcgcctcaacatcttgatggagggcaaagatcctgta
ggtggggcgtggaattttgataaagaaaatagattgccaccacctaaaaaatatgaaggt
cccaaatacttagaacacaagagggatgagatagataagcaagtagccaaagagcttgag
cacacccccacaaccgcctgggccaccacccgcaaaggtgcattggcgcagttaaaaaac
tttattgataaccactttgccgactttggcccgctagaagatgccatgacagttgataac
tgggcactccaccactcattactctctccgtatttaaacaatggactacttcacccaaca
gaggtcatccacgccgccatgaaggcctttaaaacaggatctgttcctattgaatctgca
gaaggctttatcagacaagttattggttggcgtgaatacgtcaacggtatgtattggttc
ctaggccctgactatagaaacaataatcaactagctgccacaaggcccctcttgcctctc
tttagtgatcccagcaaaactcaaatgaactgtatgaaacaaactgttactgacattaac
gatcgcgcctgggtccaccacatcccgcgcctcatgttgctctctaacttagctctcatt
actggcacgaatccgcaagcctttcttgattggatgcgcgaagtatttatagatgcatct
gaatgggtcatggttccaaacgttatcggtatgggtgttcacgcagatggcggtcagatg
atgactaagccatatgccgcaggtggtgcctacatctcacgcatgtctaactactgcaaa
ggatgttcatacaaccccaagctgcgcgttggtgatgatgcttgcccttttacaaccctc
tattgggattttcttgatcgccacaaagaggcctttgctaaaaaccaccgcatgagtcaa
caagtctttggtttaaatcgcctgagtgatcttcctgagttaaaggagagagcacaagaa
gtcttagaaggtttgcaaaaaggaacgatctaa
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