Candidatus Planktophila vernalis: A7sIIA15_04950
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Entry
A7sIIA15_04950 CDS
T05319
Name
(GenBank) formate dehydrogenase major subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn00630
Glyoxylate and dicarboxylate metabolism
pvn00680
Methane metabolism
pvn01100
Metabolic pathways
pvn01120
Microbial metabolism in diverse environments
pvn01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A7sIIA15_04950
09102 Energy metabolism
00680 Methane metabolism
A7sIIA15_04950
Enzymes [BR:
pvn01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
A7sIIA15_04950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
FdsD
Fer4_Nqo3
Fer4_7
Fer4
NADH-G_4Fe-4S_3
Fer4_9
Fer4_21
Fer4_10
Fer4_16
Fer4_8
Fer4_2
Fer4_6
Fer4_22
Fer4_4
Fer4_3
Fer4_15
Fer4_NDSU1
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ASY20203
UniProt:
A0A249KTR4
LinkDB
All DBs
Position
complement(951624..954617)
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AA seq
997 aa
AA seq
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MTMIHEHDFGTPASNKAQQVSLEIDGKSITVPADTSIMRAASMVGIDIPKLCSTDRLKAF
GSCRLCVIQVDGRNGTPSSCTTPVADGMKVVTQSEKLDRLRKGVMELYLSDHPAECATGD
ECEVHGVAKKIGITESRYAATSTHLDIAKDESNPYFTFDSTECIVCNRCVRACDEVQGTF
ALTIENRGFEARVSSSGTSFLESECVSCGACVQACPTGALTEKTLLTIGAPTSSVITTCA
YCGVGCSFKAEMRGDKLVRMVPLKDGGANEGHSCVKGRFAYGYATHSDRITKPMIRNAIT
DAWKEVSWEEAISFAAAGLKKIQAESGRNAIGGITSSRCTNEEVFVVQKMVRAAFANNNV
DTCARVCHSPTGYGLGQAFGTSAGTQDFESVEHSDVILLIGANPTSAHPVFASRMKKALR
KGAQLIVVDPRVIALVRTPGVVAAHHLQLMPGTNVAVINALAHVIVTEGLAKRDFIDARC
EEKSFKEWEAFISLPENSPEVLEASSRVPAGEIRKAARLFASAPNGSIYYGLGVTEHSQG
STMVMGIANLAMVTGNIGRKGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISNADTRKI
FNDKWGVTLDSEPGMRIPNMFDAALAGNYRGLYVHGEDIAQSDPNTSHVHAALRAMDMVI
VQDLFLNETSKFAHVFLPGTSFLEKDGTFTNAERRINRVRPVMKSATGKSEYEVTCDLST
AMGYPMSYGSGAEIMDEIAATTPTFAGVSFKKLDEVGSLQWPCNEANPEGTPTMHLETFM
RGLGQFMRTPYVATDEKATRKFPLLLTTGRVLSQYNVGAQTRRTANNIWHTEDILDLHES
DAELRGVTDGSWVKLSSRVGETIMRARITDEVPAGVVYTTFHFPESGANVITTDFSDWAT
NCPEYKVTAVEITPSAQGPGAMIETHIDGDVQLASIIRMANQIAANFPATDAPEVKMAHH
IVQFWTPVMIERLHKDVDKSLLSPIALKALEVMLVAK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgatccacgagcatgactttggtacgccggctagcaataaagcccaacaagtc
agccttgaaatcgacgggaaatcaataacagttccggcagatacgtccatcatgcgcgca
gcatcaatggtgggaattgatattccaaagctctgttcaactgatcgtctaaaggctttt
ggttcatgtcgcttgtgtgtaatccaagtagatggacgcaacggaactccttcttcttgc
acaactccggttgcagatggaatgaaagttgttacccaatctgaaaagctagatcgactt
cgcaaaggtgtcatggagctctatctctctgatcacccagcagagtgcgcaacaggggat
gagtgcgaagtccatggagttgcaaagaagattggaattacggagagccgctatgcagca
acttctactcaccttgatatagcaaaagatgagtccaatccatatttcacgtttgattca
actgagtgcattgtttgtaatcgatgtgtgcgagcatgtgatgaagtccaaggcaccttt
gcattaacaattgagaaccgcggctttgaagcacgcgtttcatcctctggcacatcattt
cttgaaagtgaatgcgtttcttgtggtgcatgtgttcaggcttgcccaactggtgcatta
actgaaaagactcttttaaccatcggcgcaccaacatcctctgtcattacaacctgtgct
tactgtggggttggctgttccttcaaagccgagatgcgtggagacaagttagttcgcatg
gttccgctcaaagatggcggcgcaaatgaaggccactcttgcgttaagggccgctttgct
tatggctatgccactcactcagatcgcattacaaagccaatgattcgaaatgcaatcaca
gatgcctggaaagaagtttcatgggaagaggcgatttcctttgcggcggcaggtttaaag
aagattcaggccgaatctggccgaaatgcaattggtggaattacatcttcacgctgtacc
aatgaagaagtattcgtagtccagaagatggtccgtgcagcttttgctaataacaatgtt
gatacctgcgctcgtgtgtgccactcaccaacaggttatggacttggtcaagcatttgga
acatcagctggaacgcaggattttgagtctgttgagcacagtgatgtgatcttgttgatt
ggtgctaacccaacatctgctcacccagtatttgcatcacgcatgaagaaggcccttcgt
aaaggcgctcaactcattgtcgtcgatccacgcgttattgcccttgttcgcacaccaggt
gttgttgcagcccatcacttgcagctaatgccagggacaaatgttgcagtgatcaacgca
ctggctcacgtcattgttactgaaggtttggcaaagcgtgactttattgatgcacgatgt
gaggagaagtcatttaaggagtgggaagcattcatttcacttcctgagaactcaccagaa
gtactagaagcatcttcacgtgttccagcaggagagattcgcaaagctgcacgcttattt
gcatcagctcctaatggctctatttactacggtcttggtgtaacagagcacagtcaaggt
tcaacaatggtgatgggtattgcaaaccttgccatggttacaggaaacattggccgtaaa
ggtgttggagttaatccactgcgcggacaaaacaacgttcaaggctcatgcgatatgggt
tcattcccacatgagctacctggctaccgtcacatttcaaatgcagatacccgcaagatt
tttaatgacaaatggggcgtcacattagattcagagcctggaatgcgtattccaaatatg
tttgatgcagcacttgctggtaactatcgtggactctatgttcacggtgaagatatcgcc
cagtctgatccaaatacctctcacgttcacgcagcacttcgcgccatggatatggtcatt
gttcaggatctattcttaaatgagacttctaagtttgcacatgtcttcttgccgggtaca
tcatttttagaaaaagacggaactttcactaacgcagaacgccgtattaaccgtgttcga
ccagtaatgaaatcggcaacgggaaagagtgaatacgaagtcacttgtgatctttctact
gccatgggctatccaatgtcttatggcagtggggccgaaatcatggatgagattgcagca
acaacaccaacatttgctggagtttccttcaaaaagcttgatgaggttggaagtttgcag
tggccatgtaatgaggcaaatcctgaaggaactccaactatgcacttggagactttcatg
cgtggcttaggtcagttcatgcgcactccttatgttgcaacagatgaaaaggcgacacgt
aaattcccgctcttgctcactactggccgtgtattgagccagtacaacgtgggagctcaa
acgcgtcgcacagccaacaacatctggcataccgaagatattttggatctgcatgaatca
gatgccgagctacgcggtgttaccgatggttcttgggtcaaactctctagccgtgtgggc
gaaacaatcatgcgtgcgcgaattacagatgaagtccctgctggagttgtttacacaact
ttccacttcccagaaagtggcgctaacgtcattacaactgatttctctgactgggcaacg
aactgtcctgaatacaaagtaactgctgttgagattactcctagtgcccaaggcccaggt
gcaatgattgagactcatattgatggagatgttcaactagcatcaattattcgtatggct
aatcagattgccgcaaactttccggcaacagatgctcctgaagttaaaatggctcaccac
atagttcagttctggaccccagtaatgattgagcgtttacacaaagatgttgataaatct
ttactctcaccaattgccctaaaggctcttgaagttatgttagttgctaagtaa
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