Candidatus Planktophila vernalis: A7sIIA15_05860
Help
Entry
A7sIIA15_05860 CDS
T05319
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03420
Nucleotide excision repair
pvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7sIIA15_05860
03430 Mismatch repair
A7sIIA15_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_05860
Enzymes [BR:
pvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7sIIA15_05860
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7sIIA15_05860
MMR (mismatch excision repair)
Other MMR factors
A7sIIA15_05860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
DEAD
DUF8079
YsdB
Motif
Other DBs
NCBI-ProteinID:
ASY20365
UniProt:
A0A249KUI0
LinkDB
All DBs
Position
complement(1121711..1123951)
Genome browser
AA seq
746 aa
AA seq
DB search
MTSTDPLLAGLNPQQAEAVTHAGGPLLVVAGAGSGKTRVLTRRIAYLMSRRNVAPYQILA
ITFTNKAAGEMKERVAELVGPIAKSMWVSTFHSACVRILRQEAMRLGYSNSFSIYDSADS
LRLVTIVAKELNLDAKRYPARQFQAMISNAKNELLGPQDYINAASNQFEQVVADVYTIYQ
QRLQRANAMDFDDLILKTVEVLQRYPEAKARFRSRFRHVLVDEYQDTNHAQYILVKELVG
TEAEGIPLAELCVVGDADQSIYGFRGATIRNILQFELDYPNASTVLLEQNYRSTQNILNA
ANAVITRNESRKEKNLWSDAGSGAPLVGYVAESEHDEAVFIADEIRQLQKESKSQPGDTA
IFYRTNAQSRVFEEVFMRNALPYKVVGGLRFYERREVKDLLAYLRVLANLEDEISLRRII
NVPKRGIGDTSLDYVDAFANANSISFWQGLLRCSEAPGLPSRAAQAINDFTSMISALNVL
VEAKTRPSVIVEAALEQSGLLKELADSVDPQDEVRVENLKELVAVSMEYEERPIEELGED
EEISLAGFLEKVSLVADADEIPEGEDHGGVVTMMTLHTAKGLEFPTVFLTGMEDGIFPHS
RTLGEKDEIEEERRLAYVGLTRARQRLYISRAEYRSTWGAPNYNPPSRFLDEIPEDVIEW
RNQGGASLTPSLVRKSRVASAPPPRATGKKISVMELQIGDRVSHDTFGLGSVVAVAGEAE
KAEATINFGQYGEKRLLLRYAPVEKL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtactgatccgctgctagctgggctcaaccctcagcaagcagaagcagttact
catgcaggtggtccattacttgttgtggccggtgctggttccggtaaaactcgtgtttta
acgcgtcgaattgcatatttaatgtcacggcgaaatgtcgctccgtatcaaattcttgct
atcaccttcaccaataaagctgccggagaaatgaaagagcgcgttgctgaattggtagga
ccaattgcaaaatcaatgtgggtttctactttccactcagcctgtgttcgcatcttgcgg
caagaagctatgcgccttggctatagcaactctttctctatttatgattcagcagattcg
ctgcgcctggtcacaattgttgctaaagaactcaacttagatgccaagcgttacccagcc
cgtcagttccaagcaatgatttcaaatgcgaaaaatgaacttcttgggccacaagattac
ataaatgcagccagcaaccaatttgaacaagtagttgctgatgtctatacgatctatcaa
caacggttacagcgtgccaacgctatggatttcgatgatttgattctaaaaacagttgaa
gtactacagcgttatccagaagccaaagcccgttttagatcacgctttcgtcatgtattg
gtagatgagtatcaggacacaaatcatgcccaatacatattggttaaagagctagttggc
acagaagccgaaggtattccacttgccgagctatgtgtggtgggagatgccgaccaaagt
atttatggctttcgtggtgcaaccattcgcaatatcctgcagtttgaacttgattaccca
aatgccagcacagttttgcttgagcagaattatcggtcaactcaaaatattttaaatgca
gctaacgcagtcattactcgcaatgaaagccgcaaagaaaagaacttgtggtccgatgcc
ggatctggtgcacctcttgttggctatgtggccgagagtgaacatgatgaagcagttttt
attgctgatgaaattcgacaattgcaaaaggaatcaaaatcccaacccggcgatacggca
attttctatagaacaaatgcccagtcccgtgtttttgaagaagtattcatgcgtaatgca
ctgccttataaggtcgtaggcggtttgcgcttctatgagcgccgagaagtcaaagacttg
cttgcctatttgcgcgtcttggccaacctagaagatgagatttctctgcgacgcattatc
aatgtccctaaacgaggcatcggtgatacatctttagattatgtggatgcgtttgcaaac
gcgaactccatttcattttggcaaggtttgcttcgttgctctgaagctccaggattaccc
tcacgtgctgcgcaagcgattaatgatttcacctcaatgatcagcgctttaaatgtctta
gttgaagcaaaaaccagaccatcagtcattgttgaagctgctcttgaacaatctgggttg
ctaaaagaattagccgatagcgttgatccacaagatgaagtacgagttgaaaacttaaaa
gaattagtcgcggtttcaatggagtatgaagagcgaccaattgaggaattaggcgaagac
gaagaaatctccttagctggttttctagagaaggtctctttggtagctgatgccgatgag
attccagaaggtgaagaccatggcggtgtcgtgacaatgatgactttgcatactgctaag
ggacttgaattcccaactgtttttctcacgggaatggaagatggaatctttcctcattcg
cgcactcttggtgaaaaagatgaaattgaagaagagcgccgacttgcctacgttggcctc
actcgtgcacgtcaacgtttatatatttcacgtgctgaatatcgctcaacttggggtgca
ccaaattacaatccaccatcacgctttcttgatgagattcctgaagatgttattgagtgg
cgcaatcaaggtggtgcatctctaacaccgtcactagttcgtaaatctcgtgtggcatca
gcgccaccaccacgagcaacaggtaagaagatttcagtaatggagcttcaaattggtgat
cgtgtgtcacatgacacatttggtttgggctctgtagttgcagttgccggggaggcagaa
aaggctgaagccacaattaacttcggtcagtacggagagaagcgattactactgcgctat
gcacccgtcgagaagctctag
DBGET
integrated database retrieval system
