Candidatus Planktophila vernalis: A7sIIA15_05995
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Entry
A7sIIA15_05995 CDS
T05319
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A7sIIA15_05995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvn03400
]
A7sIIA15_05995
Enzymes [BR:
pvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
A7sIIA15_05995
DNA repair and recombination proteins [BR:
pvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A7sIIA15_05995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
DHQS_2nd
Motif
Other DBs
NCBI-ProteinID:
ASY20390
UniProt:
A0A249KUA1
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All DBs
Position
1154779..1155993
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AA seq
404 aa
AA seq
DB search
MFETSSESPAPVRVVTEAIKEYVDRLGPIWVEGEISELNERSGMMAFIRLRDPSVDMSLS
VMCHKSVIAAIQPLPANARVVMYAKPSWYTKNGSLTLSAREIRQVGVGELLARLEALKTL
LASEGLFDSDRKVSLPLLPKKIGLICGRNTDAEKDVVENAKRRWPSVEFEIREVTVQGAA
AVSEVSEALRELEANKDVEVIIITRGGGSFEDLLPFSDESLVRLAASCVTPIVSAIGHEK
DSPLLDLVADFRASTPTDAAKRVVPDIAEEIEMISKLTDRARRTLLARIEMESTRIKSFK
DRPVMKDPHVIITSRAEIIVALKDRAHRSFAGHVKVAKEELVQIKARVRALSPQATLDRG
YSVVQLANGDIARDATKLKAGDVLRLRLAKGETNATVTPNNTKE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaacttcaagtgaatcccccgcgcctgtgcgggtggtcactgaagcaataaaa
gaatatgtagatcgccttggccctatctgggtggaaggtgaaatctcagaactcaatgaa
cgcagcggcatgatggcttttattcgcctgcgcgaccccagcgttgatatgtccttatcg
gtgatgtgtcacaaatcagttattgcagcgattcaacctctgccagcgaatgcgcgcgta
gtgatgtatgcaaagccatcttggtatacaaaaaacggctcccttactttatctgcccga
gaaatccgccaggtaggtgtgggtgaattacttgcccgtcttgaagcgttaaaaactctg
cttgcctctgagggattatttgattcagatcgaaaagttagtttgccactactgccaaaa
aagattggtcttatctgcggtcgcaatactgatgcagaaaaagatgttgttgaaaacgct
aaacgccgctggcccagcgttgaatttgaaatccgtgaagtcactgtccaaggtgctgcg
gcagtatctgaagtatctgaagcgctgcgcgaactagaggcaaataaagatgttgaagtc
atcatcattactagaggcggcggatcctttgaagatctactgccctttagcgatgagtca
ttagtgcgacttgcagcatcctgtgtaactccgattgttagcgccatcggccatgaaaaa
gattctccgctacttgatctcgttgcagattttcgagcatcgactccaaccgatgctgca
aagcgggttgtgccagatattgccgaagagatagagatgatttcaaagctgaccgataga
gcccgtcgcacattgctggctcgcattgaaatggaatccacccgcattaaatccttcaaa
gatcgcccagtaatgaaagatcctcacgtgatcatcacctctcgtgctgaaatcattgtg
gcgcttaaagatcgtgcccatcgctcttttgctggccatgtcaaagttgctaaagaagag
ttagtacaaatcaaggcccgtgttcgagctctatcaccacaggccaccttggatcgtggt
tactcagtagtgcagttagccaacggcgatattgcccgtgatgcaacgaagttaaaagca
ggcgatgttttgcgcttgcgccttgcaaagggcgagaccaatgccacagtgacgccgaat
aatacaaaggagtag
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