Candidatus Planktophila vernalis: A7sIIA15_06305
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Entry
A7sIIA15_06305 CDS
T05319
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pvn
Candidatus Planktophila vernalis
Pathway
pvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7sIIA15_06305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvn03019
]
A7sIIA15_06305
03110 Chaperones and folding catalysts [BR:
pvn03110
]
A7sIIA15_06305
03029 Mitochondrial biogenesis [BR:
pvn03029
]
A7sIIA15_06305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvn04147
]
A7sIIA15_06305
Enzymes [BR:
pvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A7sIIA15_06305
Messenger RNA biogenesis [BR:
pvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A7sIIA15_06305
Chaperones and folding catalysts [BR:
pvn03110
]
Heat shock proteins
HSP60 / Chaperonin
A7sIIA15_06305
Mitochondrial biogenesis [BR:
pvn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A7sIIA15_06305
Exosome [BR:
pvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A7sIIA15_06305
Exosomal proteins of other body fluids (saliva and urine)
A7sIIA15_06305
Exosomal proteins of breast cancer cells
A7sIIA15_06305
Exosomal proteins of colorectal cancer cells
A7sIIA15_06305
Exosomal proteins of bladder cancer cells
A7sIIA15_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ASY20444
UniProt:
A0A249KUL5
LinkDB
All DBs
Position
complement(1217357..1218979)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQIAFNEEARRGLERGMNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEID
LDDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPMALKRGME
KAVTEIVAELLSMAKAVDSKEQIAATASISAADATIGEMIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISPYFVTDQDRMEAVLEDAYVLIVNSKIANIKDLVPVLEKVMQ
SGKPLAIIAEDVEGEALATLVVNKIRGTFRSAAVKAPGFGDRRKAMLQDIAILTGATVIS
EEVGLKLDQAGLELLGRARKVVISKDETTIVEGAGDEAQIKGRVTQIRSEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
ATAAFKKFTGLTGDEATGAKIVEFAIEAPLKQIAINAGLEGGVVVEKVRNLPAGQGLNAA
TGEYVDMIKSGIIDPAKVTRSALQNAASIAALFITTEAVIADKPEKNPAPMPQGGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagattgcctttaatgaagaagcccgccgcggattagagcgcggaatgaat
atcttggccgatgcggtcaaagtgaccctaggacctcgcggacgaaacgttgtcctagag
aagaagtggggcgccccaactattactaacgatggtgtttccatcgctaaagaaattgat
ttagatgatccatgggaaaagattggcgcagagctagttaaggaagttgctaagaagaca
gatgatgtcgcaggcgatggaacaactacagcaactgttttggcccaggccctagtgcgt
gaaggacttcgtaacgtggctgccggatcaaacccaatggcccttaagcgcggtatggaa
aaggcagtgacagagattgttgctgagcttttgtctatggctaaagccgttgattcaaag
gaacagatcgcagcaacagcatctatctctgcagcagatgcaactatcggcgagatgatt
gctgaagcgatggacaaggttggcaaagaaggcgttatcactgttgaagagtcaaatact
tttggtttagagctagagctcactgagggtatgcgctttgataagggttatatctctcct
tactttgtaactgaccaggatcgtatggaagcagttctagaagatgcatacgtattgatc
gtgaactcaaagattgcaaatattaaagatctcgtaccagttcttgaaaaggttatgcaa
tcaggtaagccacttgcgattatcgctgaagatgttgaaggcgaagcgttggcaacactt
gttgtgaacaagatccgtggaactttccgctcagcagcagtaaaggcacctggctttgga
gatcgtcgcaaggcgatgcttcaagacattgcaattcttacaggtgcaactgttatctct
gaagaagttggtctcaagctagatcaagcaggacttgaactattgggtcgcgctcgcaag
gttgttatcagcaaggatgagacaacaatcgttgaaggcgctggcgatgaggcacaaatt
aagggccgcgtcacacagatccgttcagagattgagaagagcgattcagattatgaccgc
gagaagttgcaagagcgtcttgcaaagcttgctggtggcgtggctgttatcaaggctgga
gctgcaactgaggttgaactcaaggagcgcaagcaccgcattgaagatgcagttcgcaat
gcaaaggctgcagttgaagaaggaattgttgccggtggtggcgttgcacttctccaagca
gcaacagcagcatttaagaagttcactggtttaactggtgatgaagcaactggtgcaaag
attgttgaattcgcaatcgaagctccactcaagcaaatcgcaatcaacgcaggacttgaa
ggcggagttgttgttgagaaggttcgtaatcttccagcaggacaaggtctcaacgctgca
actggtgaatatgtggacatgatcaaatctggaattattgatccagctaaggtcacacgt
tctgcgctacagaacgctgcatctatcgcagccctgttcatcacaactgaagcagtgatt
gcagataagccagaaaagaatccagcaccaatgccacaaggtggcggagatatggacttc
taa
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integrated database retrieval system
