Paenibacillus vortex: PVOR_02771
Help
Entry
PVOR_02771 CDS
T05385
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pvo
Paenibacillus vortex
Pathway
pvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVOR_02771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvo03021
]
PVOR_02771
03019 Messenger RNA biogenesis [BR:
pvo03019
]
PVOR_02771
Transcription machinery [BR:
pvo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PVOR_02771
Messenger RNA biogenesis [BR:
pvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PVOR_02771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
ATPase_2
OB_RNB
AAA_22
S1CSD-TOTE-2
Spore_III_AA
AAA_25
DUF3911
Motif
Other DBs
NCBI-ProteinID:
EFU43498
UniProt:
A0A2R9T1I2
LinkDB
All DBs
Position
48622..49959
AA seq
445 aa
AA seq
DB search
MDLQISDLEGMKLTDLYKLAKKYQIPYYGQLKKKELIFAILRAQAEQSGLMFMEGVLEIL
PEGYGFLRPINYLPSTEDIYISASQIRKFDLRTGDLVSGKCRTPKENERYFGLLQVNAVN
GENPAVAAERLHFPALTPLYPQEKLVLETSPNQLSTRIMDLLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVA
ELVLSRALRLVEHKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALVETGSRMDDIIYEEFKGTGNMELHLDRRFAERRIFPAIDIRRS
GTRREEVLLNKDELDTIWAIRKNMNDSADFVEGFLKKMRDSKNNAEFLASFDVNANSSSG
NRDSGPSRPDVHRVHLQRRHLRRKP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaatatccgatttggaaggcatgaagctgacggatctgtataagctggcc
aagaaatatcagattccttattatggccagttgaagaaaaaagaactgatatttgcgatt
ctccgagcccaggcggaacagagcggcttgatgtttatggagggcgtacttgagattttg
ccggaaggatacggcttccttagaccgattaactatttgccaagcacggaggacatatac
atctcggcatcccaaattcgcaaatttgatttacggaccggagatttggtctcaggcaaa
tgtcgaacacctaaagagaacgaacgttacttcggactgctgcaggttaacgccgtaaat
ggagagaatccagccgttgcagcggaacgcttgcacttcccagccttgactcctctttat
ccgcaagaaaagcttgttcttgaaacatcccctaatcagttgtcaacccgaattatggat
ttgcttgcacctgtaggtttaggacaacgcggtttgatcgtggcgccgccaaaagcaggg
aaaacgctcctcttgaaagaaatcgccaacagcatctcaaccaacaatccagagattgaa
ctgtttgttttactcatcgatgaacggccagaagaagtaacggatatgcagcgttccgta
aagggcgaggtggttgcttcaacgttcgacgagcttccggagaaccatatcaaggttgcg
gaactggtattgtcgcgtgcattgaggctggtggagcataagaaggacgttgttattttg
ctggacagcattacccgtcttgcccgtgcatacaacctggtcattcctccttccggcaga
acgctaagcggcggtattgatcctgcggcattccatcgtccgaagcgtttcttcgggtct
gcgcgtaacgtggaagaaggcggaagtctgaccatactcgctactgccttggttgaaaca
gggtcccggatggatgacatcatttatgaggaatttaaaggaacaggcaatatggagctg
catttggaccgccgtttcgcggaacgtcgtattttcccggcaatcgacattcgtcgctcg
ggtacacggcgtgaagaggtgctgctgaacaaggatgaactggacaccatttgggcaatc
cgtaaaaatatgaacgattccgctgactttgtggaagggttcctcaaaaaaatgcgtgac
agcaagaacaatgcggaattcttggcttcatttgatgttaatgccaacagcagcagcggt
aaccgggactcagggccgagtcggccagacgtccatcgcgtgcatctgcagcgacggcac
ctcagacgtaagccctga
DBGET
integrated database retrieval system
