Paenibacillus vortex: PVOR_07670
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Entry
PVOR_07670 CDS
T05385
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVOR_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvo03019
]
PVOR_07670
Enzymes [BR:
pvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVOR_07670
Messenger RNA biogenesis [BR:
pvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVOR_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SUa-2TM
GRDB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EFU42713
UniProt:
A0A2R9SZC4
LinkDB
All DBs
Position
175411..176931
AA seq
506 aa
AA seq
DB search
MLRDAKNIAIHHKGDSMTFQDLNISPVILKALAKENYKEPTPIQAQAIPAVLAGRDLLGC
AQTGTGKTAAFSVPMIQLLNEQPPKPGMARRIRALVLSPTRELALQISDNVKAYSQFTKL
RSTAIVGGVSQKTQERALQQGADILIATPGRLLDLMNQKRIDLQHVEILVLDEADRMLDM
GFIHDVKRIISKMPSKKQTLFFSATMPAEITQLVKTLLQNPVKVEITPVSSTAERIKQSV
YLLETGNKQKQLNELMKDPSIVSALVFTRTKRGADRVVRDLTKVNITAQAIHGNKSQVSR
QTALKNFKSGETRVLVATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGLSGT
AISFCEVDEIPFLRDIEKLIGKSIPEVKDHDFPMSSSLRSAKVDRSPKSGSARPGNAKSA
AARPAKPKGDAARKPKADTARKPKPDAVRHSSTDTARKPKVDAVSNPYSEMARKLKAEVT
NKPKDGQARKRRSEGFNKGSKAGRTS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgatgcgaaaaatatagctattcaccataaaggagattccatgacatttcaa
gatttaaatatatcccctgtaattcttaaggctttagcgaaggagaattacaaggagcca
acgccgatccaggctcaggcgatcccggctgtgctggccggcagagacttgctgggctgt
gcccagaccggaacagggaaaacagccgctttttcggtacccatgatccagttattgaac
gaacaaccccctaaaccgggcatggcgcgacgcattcgtgcattggtattgtcgccgacc
cgggagcttgccctgcaaatttcggataacgtcaaggcctacagccagttcacgaaattg
cgttctaccgctattgttggcggcgtttcgcagaagacacaggaacgggcgctccagcaa
ggtgcggacatcctgattgcgaccccgggccgactgctggatctcatgaatcagaagcgt
atcgatctgcagcatgtggagattctggtgctggatgaggctgaccgtatgctggatatg
ggttttatccatgacgtgaaacgtattatctccaaaatgccgagcaaaaagcaaacgctc
ttcttctcggccacgatgcctgcggagatcacccagcttgtaaaaacattgctgcagaat
cccgtaaaagttgagatcacaccggtatcttctacggctgaacgaatcaagcaatcggtg
tatctgctggaaaccgggaataaacagaagcaattgaatgagctgatgaaggatccatcc
atcgtgtccgcattggtctttactcgtacgaagcgcggcgctgaccgagttgtgcgcgat
ctgaccaaggtgaatattacggcacaagccattcacggcaacaaatcccaggtcagccgc
cagacggcattgaagaatttcaagagcggggagacccgggtgctggtggcgacggatatc
gccgccagaggcatcgacattgacgaattgtcgcatgtcattaactttaatcttcctaat
atcccggaaacgtacgttcaccggattggccgcacagggcgtgcgggccttagcgggacg
gcgatttcgttctgcgaagtggacgagattccttttctccgcgatattgaaaaactcatc
ggaaagtccattcccgaggttaaagatcatgactttccgatgtcgagttcattaagatcc
gccaaggtggaccgttccccgaaatcgggctcggcaagaccgggcaatgccaagtcggcg
gcggccagacctgctaagcccaagggtgatgcagcccgcaaaccgaaggccgacacggca
cgcaagccgaagccggacgcagtgcgccattcgagcacggataccgcgcgtaaacccaag
gtggacgcagttagtaatccgtattcagagatggcacgtaagctaaaggcggaagtaacg
aataagcccaaggatggccaagcccgtaaacgcaggtctgaaggattcaataaaggcagc
aaggcaggcagaacctcgtaa
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