Paenibacillus vortex: PVOR_10929
Help
Entry
PVOR_10929 CDS
T05385
Name
(GenBank) RNA modification enzyme, MiaB family protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
pvo
Paenibacillus vortex
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvo03016
]
PVOR_10929
Enzymes [BR:
pvo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PVOR_10929
Transfer RNA biogenesis [BR:
pvo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
PVOR_10929
Prokaryotic type
Methylthiotransferases
PVOR_10929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
EFU42038
UniProt:
A0A2R9SX96
LinkDB
All DBs
Position
206788..208131
AA seq
447 aa
AA seq
DB search
MPSVAFYTLGCKVNFYDTEAIWQYFKNEGYDQVDFEQTADVYLINTCHVTNTGDKKSRQM
IRRAVRRNPEAIVAVTGCYAQTSPAEILDIPGVDLVIGNQDRDKIMDFIQDIEKTRQPIN
AVRNIMKTRVFEEMDVPDFAERTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSIIQQ
AHQLVGAGYKEIVLTGIHTGGYGDDLEEYRLSDLLWDLDRVDGLERIRISSIEASQIDEK
MLDVLNRSTKMCRHLHIPLQAGDDTVLKRMRRKYTTEEFYNKMGLIRQAMPDVGITTDVI
VGFPGETDEMFRNGYDLMKAIQFSEMHVFPYSKRTGTPAARMEDQVDEEVKNARVHDLID
LSEQLQLAYAEQFVGKILDVIPEREYKGAPKGGKMQGYSDNYLQLIFNGSSDLEGKLCRV
KVTKAGVNECEGELLSVMDHGLKAAAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgtagcgttttatacgttgggttgcaaagtcaatttttacgataccgaggcc
atctggcaatacttcaaaaatgaaggctacgaccaggtggacttcgaacaaaccgctgat
gtttatttgattaacacttgccacgttaccaatacaggggataaaaagagccgtcaaatg
atcagacgcgcggttcgccgcaatcctgaagccatcgtggctgtaacgggctgttatgcc
caaacctcgcctgccgagattttggatattccaggcgtggatcttgtaatcggaaaccag
gatcgcgataaaatcatggatttcattcaggatattgaaaaaacgcgccaaccgattaat
gcggtgcgtaatattatgaagaccagagtgttcgaggagatggacgttccggattttgcc
gagcgtacacgtgcattcctgaaaattcaggacggatgcaacaacttctgtacgttctgc
attattccttggtcccgcggactgtcgcggagccgggatccgaagagcattatccagcaa
gcgcatcagttggtaggagcaggatataaagaaatcgtgttgaccggtattcacacgggc
ggatacggcgacgatcttgaggaataccgattgtccgacctgttgtgggatcttgaccgg
gttgacggtctggaacgcattcgcatcagctccattgaagcgagccagatcgacgagaag
atgctggacgttctgaaccgttccactaaaatgtgccgtcacctccatattccgctgcaa
gctggagatgatacggtgctgaaacggatgcgccgtaaatatacgacggaagagttctat
aacaagatgggcttgatccgccaagcgatgccggatgtcggcattaccaccgacgtcatc
gttggatttccaggagaaacggatgagatgttccgcaacggctatgatctgatgaaggcc
attcaattctccgagatgcacgtgttcccttattccaagcgtaccggtacgccggcagca
cgcatggaggatcaggtggacgaggaagtgaagaacgcccgtgtccatgatctgatcgac
ttgtcggagcagctgcagcttgcttatgcggagcagtttgtaggcaagattctggacgtg
ataccggagcgggaatacaagggtgctcccaaaggcggaaagatgcagggttacagcgac
aactacctccagctcatattcaatggctcgtctgatctcgaaggcaaattgtgccgcgta
aaagtgaccaaagccggtgtaaatgaatgcgagggcgaactcctcagcgtcatggatcat
ggacttaaggcagctgcccagtaa
DBGET
integrated database retrieval system
