Paenibacillus vortex: PVOR_12085
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Entry
PVOR_12085 CDS
T05385
Name
(GenBank) type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo03022
Basal transcription factors
pvo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVOR_12085
09124 Replication and repair
03420 Nucleotide excision repair
PVOR_12085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvo03021
]
PVOR_12085
03400 DNA repair and recombination proteins [BR:
pvo03400
]
PVOR_12085
Enzymes [BR:
pvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PVOR_12085
Transcription machinery [BR:
pvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVOR_12085
DNA repair and recombination proteins [BR:
pvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVOR_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_22
DUF433
Motif
Other DBs
NCBI-ProteinID:
EFU41676
UniProt:
A0A2R9SWH2
LinkDB
All DBs
Position
89081..90811
AA seq
576 aa
AA seq
DB search
MVHNKPCIVQRDRTILLETTHAEFEAAREQLAHYADLIKSPATFHTYRLTPLTLWNAAAA
GMTAEMICSSLQSLSRWDVPAALLEEVGRIVGRYGQLSLLPHPTLEHSLLLRSEEESVMQ
ELKSKHSLVEIGVQFISPNEAEVSAGRRGVLKQELTRLGYPVLDHAGYLDGQYLNIFWAG
ERPDTRRSEESSGELPEEADQEFKLREYQQKAVESFRDIGGEGGNGVLVLPCGAGKTVIG
MAAMRELQCETLILTSNTTSVRQWITELLHKTSLSVDDIGEYSGQRKDVRPVTVATYQIL
THRQGKDDEQPHMKLFNERRWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDG
REHDVFSLIGPKRYEMPWKRLEEQGWIASVDCVEMKVPMPEELKEACGAAGKREQYRLAA
ENPSKLLVVKQLVDLHKGAQILVIGQYLDQLNTIARQLDAPLITGQMAQDQRNEWYKAFR
EGAVRVLVVSKVANFAVDLPDASVAIEVSGSYGSRQEEAQRLGRLLRPKQGENRAYFYAV
VSEDSREEMFAIRRQLFLIEQGYAYHDGSGEASGFC
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacaacaaaccatgcattgtccagcgggatcggaccatacttcttgaaaccacg
catgctgaatttgaggccgcacgagaacaattggcgcactatgcggatttgatcaaaagt
cctgcaacttttcatacatatcgtttgaccccgttgacgttgtggaatgccgccgccgcg
ggaatgacggcagagatgatttgctcgagtctccaatcgctgtcaaggtgggacgtgccg
gcagcgcttctggaagaggttggacggatcgttggccgctacgggcagttgtcgctgctt
ccgcatccaacgcttgagcattccttgctcctgcgcagtgaggaggaatccgtgatgcag
gaactgaagtccaagcactctctggtggagatcggggtgcagtttatttcgccgaacgag
gcagaggtgtctgccggccgccgtggcgtattaaaacaggagctgacccggcttggctat
cctgttctggatcatgcgggatatctggatggacaatatttgaacatcttctgggcggga
gaacgaccggatacgagaagaagtgaggaatcgagcggagagttgccggaagaagctgat
caagaattcaagcttcgcgagtatcagcagaaagctgtggaatccttcagggatatcggc
ggtgaaggaggcaacggggtgctcgtgctgccctgtggagccggaaagacggtgatcggc
atggctgccatgcgcgagctgcagtgtgagacgctgatccttacctccaacacaacgtct
gtcagacaatggatcaccgagctgttacacaaaacgtcgctgtctgtcgatgacattggt
gaatattccggtcagcgcaaggatgttcggccagtcacggtagccacctatcaaattttg
actcatcgccagggaaaggacgatgagcagccgcatatgaagctgtttaacgaacgccgt
tggggtttgatcatctatgatgaggttcatcttcttcctgctccggtgttccgtgcaacg
gccgatattcaagcaacacgcaggcttggcctgacggccacattggttcgggaggatgga
cgggagcatgacgtgttctcgctgatcggtcccaaacggtatgaaatgccgtggaaacgg
ctggaggaacagggctggattgcctcggtggactgcgttgagatgaaggtgccgatgccg
gaagaactcaaagaagcttgcggggctgctggcaaaagggagcagtatcggctggcggcc
gagaatccgtccaagctgctagttgtaaagcagctcgtggatttacacaaaggagctcaa
atcttggtcatcggccaatacctggatcagctcaatactattgcccggcaactggatgca
cccctcattacgggacagatggcgcaggatcagcggaatgaatggtataaggcgtttcgg
gaaggagccgtgcgcgtgcttgtcgtttctaaagtggctaatttcgcagtggacttgccg
gatgcttccgttgcgatcgaggtttcgggcagctatggttcaaggcaggaggaggcacag
cggctcggacgcttgctgcggccgaagcaaggggagaaccgggcttatttttatgcagta
gtctcagaggatagccgggaggagatgtttgccatacggaggcagctgttcttgattgag
caggggtatgcatatcacgacggttctggcgaagcctccgggttctgttga
DBGET
integrated database retrieval system
