Paenibacillus vortex: PVOR_13254
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Entry
PVOR_13254 CDS
T05385
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo00300
Lysine biosynthesis
pvo00470
D-Amino acid metabolism
pvo01100
Metabolic pathways
pvo01110
Biosynthesis of secondary metabolites
pvo01120
Microbial metabolism in diverse environments
pvo01230
Biosynthesis of amino acids
Module
pvo_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pvo_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PVOR_13254
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PVOR_13254
Enzymes [BR:
pvo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PVOR_13254
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
EFU41335
UniProt:
A0A2R9SVE4
LinkDB
All DBs
Position
13181..14512
AA seq
443 aa
AA seq
DB search
MFLHGTSKINDQGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFNASGLKFQ
VAYASKAFCVMAMCRLADEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEIEMA
LDAHIGCFVVDNVIELHMLQAIAAEKNRTVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGSAYEAVKLAEAQGNINLMGIHSHIGSQIFEVEGFQMAVQRVAEFASSVKEGLGVVF
KVVNLGGGFGIRYVDGDTPLQVSQYVKAITDAVKTHFAGLGSELPEIWVEPGRSIVGDAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANDKVEETVSIAGKC
CESGDMLIWDLDLPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRR
ESLADIISNDIVPANVAKETVTS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacacggtacaagtaagatcaacgatcaggggcatttggaaatcggcgggtgc
gacacatccgatttgaaagctcaatatggaacaccactatatattgtagacgagcagtcg
gtgcgcaaccgctgtcgggaatatatcgaggcattcaatgcttccgggttgaaattccaa
gtcgcgtatgcaagcaaggcgttttgcgtcatggctatgtgccgcttggcggatgaggaa
ggcatgtcgcttgacgtggtttccgatggcgagctgtacacagcgctgcaagcaggattt
cctgcggaacggattcatttccacgggaacaataagacgccggaagagattgaaatggcg
cttgatgcacatatcggctgttttgtagtggataacgtgattgaactgcacatgctgcag
gccattgcagccgagaagaaccgcaccgttaacattctgcttcgcgtgacaccgggtgtt
gaggctcatacgcatgagtatatctccacaggtcaaaccgactccaagtttggttttgat
atcggtaacggctccgcatatgaagcggtaaagcttgcagaagcacaagggaacattaac
ttgatgggcattcattcccacatcggctcccagatttttgaggtggaaggcttccagatg
gccgttcagcgtgttgccgagtttgcttcttctgtaaaagaaggcttgggcgttgtgttc
aaggttgtaaatcttggcggcgggtttggtatccgttatgtggatggagacactccgctt
caagtatcccagtatgtaaaagcgattacggatgcggtgaaaactcactttgctggtctg
ggttccgagcttcctgaaatttgggtggagccgggccggagcatcgttggcgatgcaggc
accacgctgtacacggtgggcacaagcaaggatattccaggcgtacgcaaatatgttgcc
gtagatggcgggatgacggacaatcctcgtccggcgttgtatgaatcgaaatatgaagca
gtgcttgccaaccgtgctaacgataaggttgaagaaaccgtgtccatcgctggcaaatgc
tgtgagagcggggatatgctcatctgggatctggatcttccgaaggtagagacaggtgat
ttgctggctgtatcctgtacaggtgcctacaactactctatggcaagcaactacaaccgt
atccgcaagccggcagtcgtatttgtgaaggatggccagagcaatctggtcgtacgccgc
gagtcgcttgcagacatcatcagtaacgacatcgtgcctgcgaatgtggcaaaagaaacc
gtaacgagctaa
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