Paenibacillus vortex: PVOR_24749
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Entry
PVOR_24749 CDS
T05385
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pvo
Paenibacillus vortex
Pathway
pvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVOR_24749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvo03019
]
PVOR_24749
03009 Ribosome biogenesis [BR:
pvo03009
]
PVOR_24749
Enzymes [BR:
pvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVOR_24749
Messenger RNA biogenesis [BR:
pvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PVOR_24749
Ribosome biogenesis [BR:
pvo03009
]
Prokaryotic type
rRNA helicases
PVOR_24749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
AAA_19
CMS1
AAA_22
AAA_30
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
EFU39543
UniProt:
A0A2R9SQB3
LinkDB
All DBs
Position
complement(148372..149982)
AA seq
536 aa
AA seq
DB search
MKNFADFGLEPRVLQAITELGFEEATPIQSQSIPIALTGRDMIGQAQTGTGKTAAFGLPL
IHKIAKEEERIVSLIMTPTRELAIQVAEEIGKLSRFKGIRSLAIYGGQDIGRQIRALKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDIQSILKLVPEERQTLL
FSATMPANIQKLASQFLKDPEHVSVIPKHVSAPLIDQAYIEVPERQKFEALSRLLDMESP
ELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQHQRDTVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHLYFIERVTR
HRIPRKPLPTIAEAIEGKQRIIAERVLEIIEQGELTEYKGLAIQLLEQYDSVQLLAAAMK
ILTGDKKEASDIHLTPEDPIRAKRRKPDIRSGRKPSGGYGGRNNSGGGGYRREGGSGSSG
NRGGYSKGGYNRDGGSSYGGNRDGGGYNRDRNNSGDRKPRSYSGGGERRPNRSGDE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatttcgcagattttggcttggagccgcgcgtgctgcaagcaattactgagctt
ggctttgaggaagccacaccgattcaatcccaatcgattccgattgctcttaccggaaga
gatatgattggacaagcacaaactggtacaggtaagacagcagcattcggcctacctctt
atccacaaaatcgctaaggaagaagagcgtatcgtctctctcatcatgacgcctacccgt
gagcttgccattcaggttgcagaagaaattggcaagttgtcccgcttcaaaggaattcgt
tccttggctatttacggcggacaagatatcgggcgccagatccgcgctttgaaaaagaag
cctcaaattattatcggtacaccaggtcgattacttgaccacatcaacagaaaaacaatc
cgacttgacgatgtacaaaccgttgtactggatgaagcggatgaaatgctggacatgggc
ttcatggaagacattcagtcgatccttaagcttgttcctgaagaacgtcaaaccttgctg
ttctccgcaactatgccggctaacattcagaagctcgcttcccagttcctgaaagatcct
gagcatgtatccgttattcctaagcacgtaagtgcacctctgattgatcaagcatatatc
gaagttcctgagcgtcaaaaattcgaagcgttgagccgacttctggatatggagtctcct
gagcttgcgattgtattcggacgtaccaagcgccgcgtagacgagctggcagaagctctg
caaaaacgcggatattccgcagacggccttcatggcgacctatcccagcatcaacgtgat
accgttatgcgtaaattccgcgatggaagcatcgatgtcctggtggcaacagatgtggca
gcacgtggtctcgacgtatcgggcgttacccacgttgtgaactttgacttgcctcaagat
ccggagagctatgtacaccgtatcggtcgtacaggccgtgcgggtaaagaaggtacggca
tggtctttcgtaactcctcgtgagatggatcacctctatttcatcgagcgcgttacacgt
catcgtatccctcgtaagcctttgccaacgattgctgaagcgattgaaggcaaacagcgc
atcatcgcggagcgtgtgcttgagatcatcgagcaaggcgaattgacggaatacaaaggt
ctggctattcaattgctggagcagtatgactccgtacaattgctggcagcagcgatgaaa
atcctgactggcgacaagaaggaagcatctgatattcatctgacaccagaagatccgatt
cgtgcgaagcgccggaagccggatatccgcagtggccgcaaaccaagcggtggctatggt
ggccgcaacaacagcggtggcggcggatatcgacgtgaaggtggcagcggcagcagtggt
aaccgtggcggctactccaaaggcggatataaccgtgatggcggcagcagctatggcggc
aatcgcgacggtggtggttacaaccgtgaccgtaacaacagcggtgaccgtaagccgcgc
tcttacagcggaggcggcgagcgtcgtcctaaccggagcggagacgaataa
DBGET
integrated database retrieval system
