Paenibacillus vortex: PVOR_29993
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Entry
PVOR_29993 CDS
T05385
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily protein
KO
K03090
RNA polymerase sigma-B factor
Organism
pvo
Paenibacillus vortex
Brite
KEGG Orthology (KO) [BR:
pvo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvo03021
]
PVOR_29993
Transcription machinery [BR:
pvo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PVOR_29993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_38
GerE
HTH_50
HTH_Tnp_ISL3
KORA
HTH_29
HTH_28
MarR_2
HTH_24
TnsD
HTH_31
HTH_10
MarR
CENP-B_N
Lipocalin_7
Phage_antitermQ
DUF1492
HTH_3
Motif
Other DBs
NCBI-ProteinID:
EFU38327
UniProt:
A0A2R9SLT7
LinkDB
All DBs
Position
complement(10636..11406)
AA seq
256 aa
AA seq
DB search
MSDKVTPPESRDEAVHLIQQYQQTKDNDIATVLIKKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELMVKLERSPDVNEIAAYLDLSVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDVNDFDSVEKRMDLQQAMSQLKEQEQKVLLLAFQEGQSQRAIAQRLGVSQMSVSRIQ
KRATEKLKQIMSNSSY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaggtgactcccccagagtccagggatgaagcagtacatttaatacaacag
tatcagcagacgaaggataacgatatcgcaacggtgctgattaagaaatatgagccgatg
gtcaaaatggctgcgggcaaaattgcccggaatcggccggatctgtatgaggacttatat
caggtgggtcagatggcattaatccgtctgcttcagcaatacgacattagcctggggatt
ccgttcgagccctatgccatgaagagcatgattgggcatatgaaaaacttcctccgcgat
aagtcgtggtacattcaagtacccagacgaatcaaggagaaaggtgccttggtccagcag
gcaattgatgagttaatggtgaagctggagaggtctccggatgtgaatgagattgcagct
tatctggatctatccgttgaagaaaccgtcgaggtgttagccggacgggaatgctatcac
tacgtatcactcgattccccattatctcaggaagaaaccggagcaacgcttggagagctg
attagctcggatgtgaatgactttgattccgtggagaagcggatggatcttcagcaggcg
atgagtcagttgaaggaacaggagcagaaggtgctgctgctggcattccaggaagggcag
tcccagcgggccattgctcagagacttggagtatcgcaaatgagtgtgtcgcgtatccag
aagcgggcaacggaaaaattgaagcagattatgtccaattcatcttactga
DBGET
integrated database retrieval system
