Pteropus vampyrus (large flying fox): 105288475
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Entry
105288475 CDS
T07815
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105288475 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvp03032
]
105288475 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
pvp03400
]
105288475 (TOPBP1)
DNA replication proteins [BR:
pvp03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105288475 (TOPBP1)
DNA repair and recombination proteins [BR:
pvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105288475 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
105288475
NCBI-ProteinID:
XP_023383248
UniProt:
A0A6P6C7B3
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSECFLKALESIKEFQSEEYLQVITEEEALEIKENDRSLYIC
DPFSGVAFDHLKELGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMCDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNVSVTHLVAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKYMGQLKMNDCTHLIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESMYRTEP
ILETKTVPDTSTPTGQINTTDGRTLSDVSHISNINASCVNESICNSILNSKVESTLENLE
NLDVSAFQAPEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYD
DELKQFWDKSAHRPHVVGAKWLLECFSKGYMLPEEPYVHANYQPVEIPVSDQPESKTALL
KKNSSLSKKDFAPNEKHDQADEDLLSQYVNKNATVVEVTKSEVGTFNDTTHVEPFNDSTH
ISLQEENQTSVSHCLPDASTITEEGLFSQKSFLVFGFSNENESNIAHIIKENAGKIVSLQ
SRIVADYAVVPLLGCEVEATVGDVVTNTWLVACIDYQTLFDPKSNPLFMPVPVMAGMTPL
QNCVISFSQCAGAEKDSLTFLAKHLGASVQEFFVRKYNAKKGMFASTHLILKEPGGSKYE
AAKKWNLPAVTIAWLLETARMGKRANESHFLIENAPKKEQSLETEITNGVNLNPHTPKHP
ATHLETHKKAVTPLDMNYFQSKAFRAVVSQHTEQEDPAGGPPPQKEPLLHLDTPSKFLCK
DKLFKPSFDVKDALAALETPGGPSQKERKLSTPLSEVIVRNLKVALANSSRDAVALSASP
QLKDVQTEKEEAPKPLHKVVVYVSKKLSKKQSELNGIAASLGADYRWNFDETVTHFIYQG
RQNDTNREYKSVKERGIHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISAVQDCRP
SNSRLPSACATTKDDEPDHLPVEENDMDNMITDDKELATSNGNGKDDSKGALTQTLEMRE
NFQKQLQEIMSATSIVKPQGQRTSLSKSGCNSASSTPDSTRSARSGRSRVLEALRQSRQT
VPDVNTEPSQNEQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDINRVEDSPFQEPL
HDSKTAEQAVCDPGNICVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPH
PKEKIITIEETREALKKQHVFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVV
GHPLRNEKYLASVAAGKWVLHRSYLEACRTAGCFVPEEDYEWGSSSILDVLTGINVQQRR
LALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVP
LFKEATHLFSDFNKLKPDNSGINIAEAAAQNVYCLKTEYIADYLMQETPPQVENYCLPEA
VSVLQNNKEPEPGLSQKRKAPTEKNKIKRPRVH
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttctgacaattct
gagtgttttcttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
gttattacagaagaagaagcattggagataaaggaaaatgatagatcactttatatctgt
gacccttttagtggcgttgcctttgatcacctcaaagagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagcagaacatcca
gtttataatatggttatgtgtgatgttactgtatcttgtacgagcctggaaaaagacaaa
agggaagaagttcataaatacgtacaaatgatgggtggacgtgtatacagagatcttaat
gtatcagtaacccaccttgttgccggagaagttggtagcaaaaaatatttagtcgctgca
aacctgaagaaacctattttgcttccttcttggataaaaacactttgggagaagtcacaa
gagaagtacatgggacaattgaaaatgaatgactgtacacatctcattgtgcaagaacca
aaaggtcaaaaatatgaatgtgccaagcgatggaatgtacactgtgtgaccacgcagtgg
ttttttgacagtgttgagaaaggtttttgtcaagatgaatccatgtataggacagagcct
atcctggaaacaaagactgtgcctgatacgtcaactcctactggtcagatcaacacaact
gatggtcgtactctttcggatgtcagccatatttccaacattaatgcaagttgcgtaaat
gaatcaatatgtaattcaattcttaatagcaaagtggagtctacacttgaaaatctagaa
aatctggatgtcagtgcatttcaagcacctgaagatttattagatggttgtcggatatat
ctttgtggtttcagtggcagaaaactagataaactgagaaggcttattaacagtggaggt
ggagttcgttttaatcagctcaatgaagatgtaactcatgttattgtgggagattatgat
gatgaattgaagcagttttgggataaatcagcccacaggcctcacgtagtgggagcaaaa
tggttgctagagtgttttagtaaaggttatatgcttcctgaagagccatatgtccatgct
aactaccagccagtggaaattccagtttccgatcaacctgaaagtaaaacagccctttta
aaaaagaacagcagcctttctaagaaagactttgctcctaatgaaaagcatgaccaagct
gatgaagatctgctctctcaatatgtaaataagaacgcaactgtagttgaagtcacgaag
tctgaagttgggacctttaatgatactactcatgttgagccttttaatgactctactcat
atttctctgcaagaagaaaaccaaacttctgtcagtcattgcctccctgacgcttctacg
attactgaagaaggtttatttagccaaaagagtttccttgtttttggttttagtaatgaa
aatgaatctaatattgcacatatcataaaggaaaatgctggaaaaatcgtgtcccttcag
agcagaattgttgctgattatgctgtggttcctctgctggggtgtgaagtagaagcaact
gtgggagacgttgttacaaatacatggctggtggcttgtatagactatcagactttattt
gatccgaagtcgaatcctctcttcatgccagtcccagtaatggcaggaatgactccttta
cagaattgtgttatttcattcagccagtgtgcaggagcagaaaaagattcgttgacattc
ttagcaaaacaccttggagcaagtgttcaagaattctttgttcgcaaatacaatgcaaag
aaaggcatgtttgccagcacacatcttatactgaaagagccaggtggttctaaatatgaa
gctgccaagaagtggaatttaccggctgtcacgatagcttggcttttggagactgctaga
atgggaaagagagcaaatgagagccattttctgattgaaaatgcacctaaaaaagagcaa
agtttagaaactgaaataacaaatggagtaaatttgaatccacatactccaaagcatccc
gccacccacctggaaactcacaaaaaagccgttacacctttagatatgaactactttcag
agtaaagctttccgtgctgtggtctcgcagcacacggagcaggaggacccagctggagga
ccgccaccccagaaggagcccttgttacacctggacacaccatcaaaatttctgtgcaag
gacaaactcttcaagccttcctttgatgtgaaggatgcactggcagccttggaaactcca
ggaggtcccagccaaaaagaaaggaaactgagtacaccgctctcagaagtcattgtcaga
aacttgaaagttgctttggcaaatagctctcgagatgctgttgctctttctgccagccct
caactgaaggatgtccaaacagagaaggaagaagctccaaagccgcttcacaaggtagtg
gtatatgttagtaaaaaactcagtaagaagcagagtgaactaaatggaattgcagcctct
ctaggagcagattacagatggaatttcgatgaaacagtgactcattttatctatcaaggg
cgacagaatgacactaatcgagaatataaatctgtaaaagaaagaggaatacacattgtt
tccgagcactggcttttagaatgtgcccaagagtataaacatcttccagaatctctttac
ccacatacgtataatcccaaaatgagcttggatatcagtgcagtacaagattgcagaccc
tctaatagtcgactgccctcagcttgtgcgacaacaaaggatgatgagccagatcatttg
cctgtagaagaaaatgatatggataatatgatcactgatgataaagaattagcaacatca
aatggaaatggaaaggatgactctaaaggagctctgacacagaccttggaaatgagagag
aatttccaaaagcagctgcaggagataatgtctgcaacatcgatagtgaaaccccaagga
cagaggacttccctttcaaaaagtggttgtaacagtgcttcttcaacccccgacagcacc
cgctctgcccgcagtggacgaagtagagtcctagaggcactgaggcagtctcgtcaaaca
gtacctgatgtcaacacagagccctcccaaaatgaacagatcatttgggatgaccccaca
gccagagaggagagagcgaggcttgccagcaatttgcagtggcctagctgtcccacacaa
tactctgaacttcaggttgacattaacagagtggaagattctcctttccaggagccttta
catgattcaaaaactgctgaacaggctgtctgtgatcctggaaacatatgtgtgactgag
gccccaaaacacccgatctctgaagaactggaaactccaataaaagacagccacctgatc
cctacaccgcaagcccccagtattgccttccccctagccaacccacctgtggctccacac
cctaaagaaaagattataacaatagaggagactcgtgaagccttaaaaaaacaacacgta
tttcagttgtcatctctgaatcctcaagaacgtattgattattgtcatctgattgaaaaa
ctaggtgggttagtgatagagaagcagtgctttgatcctaactgtacgcacattgttgtg
ggacatccacttcgaaatgagaagtatttagcctcagtggcagctgggaagtgggtgctt
catcgctcctaccttgaagcgtgcaggactgctgggtgctttgtgccggaagaagactat
gaatggggaagtagttccatacttgatgttttgactggaatcaatgtgcagcaacgaaga
ctagcacttgcagcaatgagatggagaaaaaaaatccagcaaagacaggaatcaggcatt
gttgagggggcatttagtgggtggaaggttatcttacatgttgaccagtcccgagaagca
ggattcaaacgccttcttcagtctggaggagcaaaggtactacctggtcattctgtacct
ttatttaaagaagctacacatctcttttctgactttaataaactgaaaccagataactca
ggaattaatatagcagaagctgctgcccagaacgtgtactgcttgaaaacagaatacatt
gctgattaccttatgcaggaaactcctcctcaagtagaaaattattgtctaccagaagct
gtttcagttcttcagaataataaggaacctgagcctggattatcacaaaagaggaaagct
cctacagagaaaaacaaaatcaaacgacctagagtacactaa
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