Pteropus vampyrus (large flying fox): 105288809
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Entry
105288809 CDS
T07815
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pvp
Pteropus vampyrus (large flying fox)
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvp04040
]
105288809 (SCN11A)
Ion channels [BR:
pvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105288809 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
105288809
NCBI-ProteinID:
XP_011353481
UniProt:
A0A6P3PW38
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MDDWCYPVIFPDARNFRPFTSDSLAAIEKRIAIQKEKKELKDPTAAEPQPRPQLDLKASR
KLPKLYGDIPHELIAKPLEDLDPFYRNHKTFMVLNKRRTIYRFSAKRALFIFGPFNSIRS
LAIRISVHSLFSMFIICTVIINCMFMAAARGGKNNSSIETDRAEYVFTGIYIFEALIKIL
ASGFILDEFSFLRDPWNWLDSIVIATAFVSCSPNIRLSDISLSSLRTFRVFRALKAISVV
SGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGNLNQMCVREDCKNATNLDD
YCYEKKDSTEFKICNSGVGRSDCSEKFECIHTQKNPDYGYTNFDNFGWSFLAMFRLMTQD
SWEKLYRQTLRTSGLFAVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAKEK
MFQEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGNRKRKSFFFRESEKEQV
PGSESDEDSPKKPYLLEQTKRLSQNLSVDFCEEHRDPLQRQRALSAVSILTITMQEQEKS
QEACFPCGENLASRYLVWDCSPRWICFKKALRTVMTDPFTELAITICIIINTIFLAMEHH
KMDQSFERILYTGNLVTLGEQLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVF
IFSVVGMQMFGSKFNSEKCPRRWHMGDFYHSFLVVFRILCGEWIENMWECMQNVDNAQLC
IVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNSEGEAKKTKVQLALDRFHRAFCFML
HTLEHFCCKRYRRQNLPKQKEVAGGSSAESKDVIPLVTEVKKGPETWEEFSVLTSAPKTL
VVGHDWTWLAPLAEEEDDIESPEEDNAQPVTQPEAGKQAHELHQEAKSSSPRVQNVEIDV
FSEDDAYLSVQNPRKKSDAISVFSECSTIDLQDPFRRVPEMVLQKEPERCLPKGLGCCFP
CCTVNKRKSPWIIWWKLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVNLHKQPNIQA
LLNCTDNIFTFIFIMEMGLKWVAFGFWKYFTSAWCWLDFIIVIVSVLNLIDLKVLKSLRT
LRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLFSGKFGRCT
NVTENSSLVIDPNLVANLSQCESRNFTWVNLKVNFDNVGMAYLALLQVATFKGWMDIMYA
AVDSNEKEDQPVFERNKYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFL
TEEQNKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTNQIFDVIIIILIILNMVSMMA
ESYNQSKTMRLILDYLNLAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVLSIVSMM
ISALEDQEHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLF
LIMFIYAIFGMSWFCKVKPDSGIDDIFNFQTFAGSLLCLFQITTSAGWDTLLSPMLQSDD
SCKPKSENCYLSTTAISYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEI
FYEVWEKFDPEATQFIKYSALSDFADALPEPLRVAKPNKFQFLVMDLPMVTGDRLHCLDI
LFAFTTRVLGDSNGLDSMKAMMEEKFMEANPLKKLYEPIVTTTKRKEEERCAAVIQKAFR
KYMMKVTMSTLEDRPRSPLQTPCNGSLSSSGVAEGKVHCD
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtgctacccagtgattttcccagatgcgcggaatttccgccccttcact
tctgactctctggctgcaattgagaagaggattgccatccaaaaggagaaaaaggagctc
aaagacccgacagcagcagaaccccagcctcgacctcagcttgacctgaaggcctccagg
aagttgcccaagctctatggtgacattccccatgagctgatagcgaagcccctggaagac
ttggacccattctacagaaaccataagacatttatggtgttgaacaaaaggagaacaatc
tatcgcttcagtgccaagcgcgccttattcatttttgggcctttcaattcaatccgaagt
ttagccattagaatctcggtgcattcattattcagcatgttcatcatttgcactgtcatc
atcaactgcatgttcatggctgcagctcgtggtgggaagaacaacagtagtatagagacc
gaccgtgctgagtatgtcttcactggtatttatatttttgaagctttgataaaaatatta
gcaagcggttttattctggatgagttttcttttcttcgagatccatggaattggctggac
tccattgtcattgcaacagcgtttgtatcatgttcaccaaacatcaggctcagcgacatc
agtctgtcatccctacgtaccttccgggtgttcagagctttgaaagcaatttcagtagtt
tcaggtctgaaggtcatcgtgggggccttgctgcgctctgtgaagaagcttgttgacgtg
atgatcctgactcttttttgcctaagtatctttgccctcgttggtcagcagctcttcatg
ggaaatctaaaccagatgtgtgtcagggaggactgtaagaatgccactaacttggacgac
tattgttatgaaaagaaagattccactgaattcaaaatatgtaactccggagtcggtaga
agtgactgttctgaaaaatttgaatgcatacacactcaaaagaatcctgactatggctat
acaaattttgacaactttggctggtcatttcttgccatgttccggcttatgacccaagat
tcctgggagaagctttatagacagaccttacgcacctcggggctcttcgcagtcttcttc
ttcgtggtggtcatcttcctgggctctttctacctcattaatttaaccctggctgttgtc
accatggcttacgaagaacagaataagaacgtagctgctgagacggaggccaaggagaag
atgtttcaggaagcccagcagctgttaaaggaagagaaagaggctctggttgccatggga
attgacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagagaaag
ctatttggtaacaggaaaaggaagtccttttttttcagagaatctgagaaagaacaggtt
ccaggatcagagtctgatgaggattccccaaaaaagccttacctcctagagcaaaccaaa
cgactgtctcagaacctgtcagtggacttctgcgaagagcacagagaccctctccaaagg
cagagggcgctgagtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaatcc
caggaggcttgcttcccgtgtggggaaaacctggcatccagatacctcgtgtgggactgt
agcccccggtggatatgctttaagaaggccctgagaaccgtgatgaccgacccctttact
gagctggccatcaccatctgcatcataatcaatactatcttcttggccatggagcatcac
aaaatggaccagagttttgagcgtattttgtatacaggaaatttggtaactttaggcgaa
cagctaagagtcttcaagttagccaaatcgtggccaactttaaacacactgattaagatc
atcggccactccgttggagccctgggaaacctgaccgtggtcctggccattgtggtcttt
attttctcagtagtcggcatgcagatgttcggctctaaattcaattccgaaaagtgtcca
cggcgctggcacatgggggacttttatcactcttttctggtggtgttccgcatcctctgt
ggggaatggatcgaaaacatgtgggagtgtatgcaaaacgtcgataacgcacagctgtgc
attgttgtctttctgttgatcatggtgataggaaagctcgtggtactcaacctcttcatt
gccttgctgctcaattcctttagcaatgaggagagagatgggaactcagaaggagaggcc
aagaaaaccaaagtccagttagccttggatcggttccaccgggctttttgttttatgcta
catactcttgagcatttctgttgcaagcggtacaggaggcaaaacttaccaaagcagaaa
gaggtggcaggaggctcttctgcagagagcaaagatgtcattcccctggtcacagaagtg
aaaaaaggcccagagacctgggaggagttcagtgtcctaacttctgcaccaaagaccttg
gttgtcgggcatgattggacttggttggccccactcgccgaggaagaagatgacattgaa
tctcctgaggaagataacgcacagcctgtcacacaacctgaggctggaaaacaggcccat
gagctccatcaggaagccaagtccagcagcccaagagttcagaatgtggaaattgatgtg
ttctcagaagacgatgcttatctgtcagtacagaatccccgaaagaagtctgatgctatc
agtgtattctcagaatgtagcaccatcgatctgcaagatccctttaggcgggtacctgaa
atggttctccagaaggagccagagagatgtttgcccaaaggcctgggttgctgcttccca
tgctgtactgtgaacaagagaaagtccccctggatcatttggtggaaactgcggaaaacc
tgctaccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctg
agcagtggggcactggtgttcgaagatgttaaccttcacaaacaacccaatatccaagca
ttacttaattgtactgacaatattttcacattcatttttatcatggagatgggtctgaaa
tgggtggcctttggattttggaagtatttcaccagcgcctggtgctggctcgatttcatc
atcgtgattgtgtctgtgctcaatctcatcgacttaaaggtcttgaagtccctccggact
ctacgggcactgaggcccctgcgggcactgtcccagtttgaaggaatgaaggtggtagtt
aatgctctcattggtgccatacctgccattctgaatgttttgcttgtctgcctcattttc
tggctcatattttgtatcctgggagtaaacttgttttctggaaagtttggaaggtgcact
aatgtaacagagaactcgagcttggtcatagatcccaaccttgttgcaaacctaagtcag
tgcgaaagtagaaatttcacctgggtcaacctgaaagtcaactttgacaacgtgggaatg
gcttacctcgccctgctgcaggtggcgacgtttaagggctggatggatattatgtatgca
gctgttgattccaacgagaaggaagaccagccagtttttgagaggaacaaatacatgtac
ctttacttcgtagtttttattatctttggctcattcttcactctgaatctctttattggt
gttattatcgataacttcaaccaacagcagaaaaagataagtggccaagacatttttttg
acagaagaacagaataaatactataatgcaatgaaaaaattaggatccaaaaaacctcag
aagcccattccaagacctctgaacaaatgccagggtcttgtgtttgacctggtcaccaac
cagatctttgacgtcatcatcatcatcctcattatcctcaacatggttagcatgatggcc
gaatcatataatcaatctaaaaccatgaggctcatccttgactatctcaacctggccttt
gtggtcatctttacaattgagtgtctcatcaaaatctttgctttgaggcaatactacttc
accaatggctggaatttatttgattgtgtgatcgtggtcctttctattgttagtatgatg
atttctgccttggaagaccaggagcacattcctttccccccaacactcttcagaattgtc
cgcttggctcggattggcagaatcttgaggcttgttcgggcagctcgaggaatcaggact
ctcctttttgctctgatgatgtctcttccctctctattcaacatcggtcttctgctcttt
ctgattatgtttatctatgccattttcggtatgagctggttttgcaaagtgaagccagac
tctgggattgatgacatattcaacttccaaacttttgcaggcagcttgctctgtctcttc
cagataaccacgtcagcgggctgggataccctcctcagccccatgttacagtcagatgat
tcctgcaaacccaagtctgagaattgttacctctctaccacagccataagctattttgtc
agttacatcatcatctcttttctcattgttgtcaacatgtatattgctgtgattttagaa
aacttcaatacagccactgaagaaagtgaagaccctttgggtgaagatgactttgaaata
ttctatgaagtctgggaaaagtttgacccagaagcgacacagtttatcaaatattctgcc
ctttctgattttgccgatgcccttcctgagcccttgcgtgtggcaaagccaaataaattt
caatttctagtaatggacttgcccatggtgactggagatcgcctccactgcctggatatc
cttttcgctttcaccactagggtactcggtgactccaatggcctggatagcatgaaagca
atgatggaggagaagttcatggaagccaaccctctcaagaagttatatgaacccattgtc
accaccaccaagagaaaggaagaggagagatgcgccgccgttatccagaaggcctttcga
aagtacatgatgaaggtgactatgagcaccttggaagacaggcctcgttcaccactccag
acaccctgcaatgggagcttgtccagctccggggtggccgagggcaaggtccactgtgac
tga
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