Pteropus vampyrus (large flying fox): 105289730
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Entry
105289730 CDS
T07815
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105289730 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvp04121
]
105289730 (TRIM54)
Ubiquitin system [BR:
pvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105289730 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
Sina_RING
DUF349
FlgN
CoiA_N
DUF1421
DUF5799
Zn_ribbon_FGT1_2
SpoIISA_toxin
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105289730
NCBI-ProteinID:
XP_011354785
UniProt:
A0A6P3Q633
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLTQRFETLCAVLEERKGELLQALARKQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccttgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaatcct
ctgtggcaatcccggggctccaccactgtgtcttccgggggccgtttccgctgcccgtct
tgcagacatgaggttgtcctggaccgacatggtgtctacggcctgcagcgaaacctgcta
gtggagaacattatagacatttacaagcaggagtcttctcggccactgcactccaaggct
gagcagcacctcatgtgtgaggagcatgaagaggagaagatcaatatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccgctgcccaccatttacaaacgccagaagagtgagctcagtgatggcatcgcgatg
ctggtggcgggcaatgaccgtgtgcaagccgtgatcacacagatggaggaggtgtgccag
accattgaggacaacagccggaggcagaagcagttgctaacccagaggttcgagactctt
tgcgcggtgctggaggagcggaagggtgagctgctgcaggctctggcgcggaagcaggag
gagaagcttcagcgagtcaggggcctcatccgccagtacggagaccacctggaggcgtcc
tctaaactcgtggagtccgccatccagtccatggaggagccgcagatggcgctctaccta
cagcaggccaaggagctgatcaataagtga
DBGET
integrated database retrieval system
