Pteropus vampyrus (large flying fox): 105292308
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Entry
105292308 CDS
T07815
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pvp04142
Lysosome
pvp04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
105292308 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105292308 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
105292308 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvp02000
]
105292308 (NPC1)
Transporters [BR:
pvp02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
105292308 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
ACR_tran
Motif
Other DBs
NCBI-GeneID:
105292308
NCBI-ProteinID:
XP_023386609
UniProt:
A0A6P6CGV2
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MGARGPALGLLLLLLCPAQVFSHSCVWYGECGIASGDKRYNCKYSGPPMLLPKDGYDLVQ
ELCPGFFSDNISLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNMFCELTCSPRQSEF
LNVTATEDYFDPVINQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKD
AKDCNATNWIEYMFNKDNGQAPFTITPIFSDLPAHGMKPMNNATKGCDESVDEVTGPCSC
QDCSAVCGPEPKPPPPPVPWRILGLDAMYVIMWTTYMAFLLVFFGTFFAVWCYRKRYFVS
EYTPIDSNIAFSVNARDKGEASCCDPLGAAFEGCLRRLFTQWGSFCVRNPGCVIFFSLVF
IATCSSGLVFVQVTTNPVHLWSAPSSQARLEKEYFDTHFGPFFRTEQLIIRAPHTATHTY
QPYPTETDVPFGPPLDIEILHQVLDLQTAIENISVSYNNETVSLQDICLAPLSPYNKNCT
IMSVLNYFQNSHSTLDHKIGDDFYVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYSNATALVITFLVNNYYNNTEKLQRAQAWEREFINFVKNYKNPNLT
ISFTAERSIEDELNRESNSDIFTVVISYAVMFLYISIALGHIKSCSRLLVDSKISLGITG
IFIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVLAIGVDNIFILVQTYQRDERLQGETL
DQQLGRILGEVAPSMLLSSFSETVAFFLGNCSSNSTNPIGCAVLIDFLLQITCFVSLLGL
DIKRQEKNRLDVLCCVRGAEDGTGIQASESCLFRFFKNSYSPLLLKDWMRPIVIAVFMGV
LSFSIAVLNKVEIGLDQSLSVPDDSYVMDYFKSLSQYLHAGPPVYFVLEEGHNYTSLAGQ
NMVCGGVGCNSDSLVQQIFNAAELENYTRIGFAPSSWIDDYFDWIKPQSSCCRVYNNTDQ
FCNASVADPTCIRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYGSAVNI
LGNDTSVGATYFMTYHTVLQTSADFIDAMRKARLIAGNITKTMSQEGSNHHVFPYSVFYV
FYEQYLTIIDDTIFNLCVSLGAIFLVTVVLLGCELWSAVIMCVTIAMILVDMFGIMWLWG
ISLNAVSLVNLVMSCGISVEFCSHITRAFTVSAKGSRVERAEEALSHMGSSVFSGITLTK
FGGIVVLAFAKSQIFQIFYFRMYLAMVLLGASHGLIFLPVLLSYIGPSINKAKSLATQER
YQGTEREQLLNF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgcgcggcccggccctgggcctcctcctgttgctgctgtgcccggcgcaggtg
ttttcacactcctgtgtttggtatggagagtgtggaattgcatctggagataagaggtac
aattgcaaatattctggaccaccaatgcttttgccaaaagatggttatgacttagtgcag
gaactctgtccaggattcttttctgacaatatcagtctttgttgtgatgttcagcagctt
cagacactgaaagacaacctgcagctgcctctacagtttctgtccagatgtccttcctgt
ttttataacctactgaacatgttttgtgagctgacatgtagccctcgacaaagtgagttt
ctgaacgttacagcaactgaagattattttgatcctgttataaatcagacgaaaactaat
gtaaaagaattgcagtactatgttggagagagttttgccaatgcgatgtacaatgcctgc
agggacgtggaggccccctccagtaatgacaaagccctgggactcctgtgtgggaaggac
gccaaagactgcaatgctaccaactggattgagtacatgttcaataaggacaatggccag
gcacctttcactatcacacccattttttcagatcttccagcccatgggatgaagcccatg
aacaatgctaccaagggctgtgacgagtctgtggatgaggtcacggggccgtgcagctgc
caggattgctcagccgtttgtggccccgagcccaagccaccaccccctcctgttccctgg
agaatcttgggcttggacgccatgtatgtcatcatgtggaccacctacatggcattttta
cttgtgttttttggaacattttttgctgtgtggtgctacaggaaacggtattttgtctcc
gagtacacccccattgatagcaatatagctttctctgtcaatgccagagacaaaggggag
gcatcctgctgcgacccactcggtgcagcatttgagggctgtttgaggcggctcttcaca
cagtggggctctttctgtgtccgaaaccctggctgcgttattttcttctccctggtcttt
atcgccacatgttcttcgggcctggtgtttgtccaggtcacaaccaatccagttcacctc
tggtcagcccccagcagccaggcgcgcctagaaaaagagtactttgatacccactttggg
cctttctttcgcacggagcagctcatcatccgggccccccacaccgccacacacacttac
cagccataccccacagagaccgatgtgccctttggacctccactggacatagaaattttg
caccaggttcttgacttacaaacagccatcgaaaacattagtgtgtcttataacaacgag
accgtgtcacttcaagacatctgcttggcccctctatcaccatataacaagaactgtacc
attatgagtgtgttgaattacttccagaacagtcactcgacgctggaccacaaaataggg
gatgacttctatgtgtatgcggattaccacacgcactttctttactgtgtacgggctcct
gcctctctgaatgataccagtttgctccatgatccttgcctggggacatttggtggacca
gtattcccatggctcgtgttagggggctatgatgatcaaaactacagtaatgccacagcc
cttgtgattacctttcttgtcaataattattataataataccgagaagctccagagggcc
caggcctgggaacgagaatttattaatttcgtgaaaaactacaagaatccaaatctgacc
atttctttcactgctgaacgaagcattgaagatgaactaaatcgtgaaagtaacagtgat
atcttcactgttgtaatcagctatgccgtcatgtttctgtatatttccatagccttgggg
cacatcaaaagctgtagcaggcttttggtagattctaaaatctcccttggcatcacgggt
atcttcatcgtgttgagctcggtggcgtgctcgttgggcatcttcagctacatcgggatc
cccctcaccctcattgtgattgaagtcatcccgttcctggtgctggccattggggtggac
aacatcttcattctggtccagacctaccagagagatgaacgtcttcaaggggaaaccctg
gaccagcagctgggcaggatccttggagaagtggctcctagtatgctcctgtcatccttt
tcagagacagtagcatttttcttaggtaattgctcttcgaattctaccaatcctataggt
tgcgcagtcctcattgacttccttcttcagattacctgttttgtgagtctcttggggtta
gacattaagcgtcaagagaaaaaccggctagacgtgctttgctgtgtcagaggtgcggaa
gatggaacaggcatccaggcctcagagagctgcttgtttcgtttcttcaaaaactcctat
tctccacttctgcttaaggactggatgcgaccaattgtgatagcagtattcatgggtgtt
ctgtcattcagtattgcagtcctgaacaaagtagaaattggattggatcaatctctttca
gtgccagatgactcctacgtgatggattatttcaagtccctcagtcagtacctgcatgca
ggcccacccgtctactttgtcctggaggaagggcacaactatacttctctggcagggcag
aacatggtgtgcgggggcgtgggctgcaacagcgactccctggtgcagcagatcttcaac
gcagccgagctggaaaactatacccggataggctttgctccctcatcctggattgacgat
tactttgattggattaagccacagtcttcttgctgtagagtctacaataacactgaccag
ttctgcaacgcttcagtggctgaccctacctgcatccgctgcaggcctctgactcccgag
ggcaaacagaggcctcagggtggagacttcatgagattcctgcccatgttcctttctgat
aacccgaatcccaagtgtggcaaagggggacatgctgcttatgggtcagcagttaacatc
cttggtaatgacacgagtgtcggagccacgtacttcatgacctaccacaccgtgcttcag
acctctgctgactttattgacgccatgagaaaagctcgcctcatcgctggtaacatcacc
aaaaccatgagccaggaaggaagtaaccaccatgtattcccatacagtgtgttctatgtc
ttttacgaacagtacctgactattattgatgacacgatctttaacctctgcgtgtccctg
ggagcgatctttttggtgactgtggttctcctgggctgtgaactgtggtctgcagtgatc
atgtgtgtcaccatcgccatgatcttagtcgacatgtttggcatcatgtggctgtggggc
atcagtctgaatgcagtttccttggtcaacttggttatgagctgtggcatttccgtggag
ttctgcagccacataacgagagcattcacagtgagtgcgaagggaagccgtgtggaacgg
gcagaagaggcactctctcacatgggcagttctgtattcagtggaatcacacttacaaag
tttggagggattgtggtattggcctttgccaaatctcaaattttccagatattttacttc
aggatgtatttagctatggtcttgctgggagccagtcatggattaatattcctccctgtc
ttactcagttatataggaccatcaataaataaagccaaaagtttggctactcaagagcga
tatcaaggtacagagagagaacaactcctcaatttctaa
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